fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G04070 ANAC047 NAC domain containing protein 47 (.1.2)

>AT3G04070.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, HindIII, HpaI, NdeI, NheI, NotI, PacI, PstI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 12
EcoRI G|AATTC 498
EcoRV GAT|ATC 136
KpnI GGTAC|C 303
NcoI C|CATGG 154
PvuII CAG|CTG 254
SacI GAGCT|C 873
StyI C|C[AT][AT]GG 154


Click here to view TAIR data

>AT3G04070.1 length:1080
ATGATAAGCA AGGATCCAAG ATCGAGTTTA CCTCCAGGGT TTCGATTTCA 
50
TCCAACAGAT GAAGAACTCA TTCTCCATTA CCTAAGGAAG AAAGTTTCCT 
100
CTTCCCCAGT CCCGCTTTCG ATTATCGCCG ATGTCGATAT CTACAAATCC 
150
GATCCATGGG ATTTACCAGC TAAGGCTCCA TTTGGGGAGA AAGAGTGGTA 
200
TTTTTTCAGT CCGAGGGATA GGAAATATCC AAACGGAGCA AGACCAAACA 
250
GAGCAGCTGC GTCTGGATAT TGGAAAGCAA CCGGAACAGA TAAATTGATT 
300
GCGGTACCAA ATGGTGAAGG GTTTCATGAA AACATTGGTA TAAAAAAAGC 
350
TCTTGTGTTT TATAGAGGAA AGCCTCCAAA AGGTGTTAAA ACCAATTGGA 
400
TCATGCATGA ATATCGTCTT GCCGATTCAT TATCTCCCAA AAGAATTAAC 
450
TCTTCTAGGA GCGGTGGTAG CGAAGTTAAT AATAATTTTG GAGATAGGAA 
500
TTCTAAAGAA TATTCGATGA GACTGGATGA TTGGGTTCTT TGCCGGATTT 
550
ACAAGAAATC ACACGCTTCA TTGTCATCAC CTGATGTTGC TTTGGTCACA 
600
AGCAATCAAG AGCATGAGGA AAATGACAAC GAACCATTCG TAGACCGCGG 
650
AACCTTTTTG CCAAATTTGC AAAATGATCA ACCCCTTAAA CGCCAGAAGT 
700
CTTCTTGTTC GTTCTCAAAC TTACTAGACG CTACAGATTT GACGTTTCTC 
750
GCAAATTTTC TAAACGAAAC CCCGGAAAAT CGTTCTGAAT CAGATTTTTC 
800
TTTCATGATT GGCAATTTCT CTAATCCTGA CATTTACGGA AACCATTACT 
850
TGGATCAGAA GTTACCGCAG TTGAGCTCTC CCACTTCAGA GACAAGCGGC 
900
ATCGGAAGCA AAAGAGAGAG AGTGGATTTT GCGGAAGAAA CGATAAACGC 
950
TTCGAAGAAG ATGATGAACA CATATAGTTA CAATAATAGT ATAGATCAAA 
1000
TGGATCATAG TATGATGCAA CAACCTAGTT TCCTGAACCA GGAACTCATG 
1050
ATGAGTTCTC ACCTTCAATA TCAAGGCTAG 
1100

>AT3G04070.1 longest ORF length:359
MISKDPRSSL PPGFRFHPTD EELILHYLRK KVSSSPVPLS IIADVDIYKS 
50
DPWDLPAKAP FGEKEWYFFS PRDRKYPNGA RPNRAAASGY WKATGTDKLI 
100
AVPNGEGFHE NIGIKKALVF YRGKPPKGVK TNWIMHEYRL ADSLSPKRIN 
150
SSRSGGSEVN NNFGDRNSKE YSMRLDDWVL CRIYKKSHAS LSSPDVALVT 
200
SNQEHEENDN EPFVDRGTFL PNLQNDQPLK RQKSSCSFSN LLDATDLTFL 
250
ANFLNETPEN RSESDFSFMI GNFSNPDIYG NHYLDQKLPQ LSSPTSETSG 
300
IGSKRERVDF AEETINASKK MMNTYSYNNS IDQMDHSMMQ QPSFLNQELM 
350
MSSHLQYQG
400