fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G04070 ANAC047 NAC domain containing protein 47 (.1.2)

>AT3G04070.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, HindIII, HpaI, NdeI, NheI, NotI, PacI, PstI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 12
EcoRV GAT|ATC 136
KpnI GGTAC|C 303
NcoI C|CATGG 154
PvuII CAG|CTG 254
SacI GAGCT|C 825
StyI C|C[AT][AT]GG 154


Click here to view TAIR data

>AT3G04070.2 length:1032
ATGATAAGCA AGGATCCAAG ATCGAGTTTA CCTCCAGGGT TTCGATTTCA 
50
TCCAACAGAT GAAGAACTCA TTCTCCATTA CCTAAGGAAG AAAGTTTCCT 
100
CTTCCCCAGT CCCGCTTTCG ATTATCGCCG ATGTCGATAT CTACAAATCC 
150
GATCCATGGG ATTTACCAGC TAAGGCTCCA TTTGGGGAGA AAGAGTGGTA 
200
TTTTTTCAGT CCGAGGGATA GGAAATATCC AAACGGAGCA AGACCAAACA 
250
GAGCAGCTGC GTCTGGATAT TGGAAAGCAA CCGGAACAGA TAAATTGATT 
300
GCGGTACCAA ATGGTGAAGG GTTTCATGAA AACATTGGTA TAAAAAAAGC 
350
TCTTGTGTTT TATAGAGGAA AGCCTCCAAA AGGTGTTAAA ACCAATTGGA 
400
TCATGCATGA ATATCGTCTT GCCGATTCAT TATCTCCCAA AAGAATTAAC 
450
TCTTCTAGGA GCGGTGGTAG CGAACTGGAT GATTGGGTTC TTTGCCGGAT 
500
TTACAAGAAA TCACACGCTT CATTGTCATC ACCTGATGTT GCTTTGGTCA 
550
CAAGCAATCA AGAGCATGAG GAAAATGACA ACGAACCATT CGTAGACCGC 
600
GGAACCTTTT TGCCAAATTT GCAAAATGAT CAACCCCTTA AACGCCAGAA 
650
GTCTTCTTGT TCGTTCTCAA ACTTACTAGA CGCTACAGAT TTGACGTTTC 
700
TCGCAAATTT TCTAAACGAA ACCCCGGAAA ATCGTTCTGA ATCAGATTTT 
750
TCTTTCATGA TTGGCAATTT CTCTAATCCT GACATTTACG GAAACCATTA 
800
CTTGGATCAG AAGTTACCGC AGTTGAGCTC TCCCACTTCA GAGACAAGCG 
850
GCATCGGAAG CAAAAGAGAG AGAGTGGATT TTGCGGAAGA AACGATAAAC 
900
GCTTCGAAGA AGATGATGAA CACATATAGT TACAATAATA GTATAGATCA 
950
AATGGATCAT AGTATGATGC AACAACCTAG TTTCCTGAAC CAGGAACTCA 
1000
TGATGAGTTC TCACCTTCAA TATCAAGGCT AG
1050

>AT3G04070.2 longest ORF length:343
MISKDPRSSL PPGFRFHPTD EELILHYLRK KVSSSPVPLS IIADVDIYKS 
50
DPWDLPAKAP FGEKEWYFFS PRDRKYPNGA RPNRAAASGY WKATGTDKLI 
100
AVPNGEGFHE NIGIKKALVF YRGKPPKGVK TNWIMHEYRL ADSLSPKRIN 
150
SSRSGGSELD DWVLCRIYKK SHASLSSPDV ALVTSNQEHE ENDNEPFVDR 
200
GTFLPNLQND QPLKRQKSSC SFSNLLDATD LTFLANFLNE TPENRSESDF 
250
SFMIGNFSNP DIYGNHYLDQ KLPQLSSPTS ETSGIGSKRE RVDFAEETIN 
300
ASKKMMNTYS YNNSIDQMDH SMMQQPSFLN QELMMSSHLQ YQG
350