fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G04420 ANAC048 NAC domain containing protein 48 (.1.2)

>AT3G04420.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
BamHI G|GATCC 352
StyI C|C[AT][AT]GG 139
XhoI C|TCGAG 932


Click here to view TAIR data

>AT3G04420.2 length:1023
ATGGAGAATC CGGTGGGTTT AAGATTCCGT CCGACCGACA AGGAGATCGT 
50
CGTCGATTAC CTCCGACCAA AAAACTCCGA TAGGGACACG AGTCATGTTG 
100
ATCGAGTCAT TAGCACAGTC ACTATCCGTA GCTTCGACCC TTGGGAGTTA 
150
CCTTGTAAGA TCAAACTGAA AGATGAGTCT TGGTGTTTCT TCAGCCCTAA 
200
GGAGAACAAA TATGGCAGAG GTGATCAACA AATTAGAAAA ACGAAATCTG 
250
GTTACTGGAA GATTACTGGC AAACCAAAGC CTATCTTGCG TAACCGCCAA 
300
GAGATCGGTG AGAAAAAGGT TTTGATGTTT TACATGAGTA AGGAACTTGG 
350
TGGATCCAAA TCCGACTGGG TTATGCACGA GTACCATGCT TTCTCTCCTA 
400
CTCAGATGAT GATGACATAT ACAATATGTA AAGTTATGTT TAAGGGTGAC 
450
GTGAGAGAGA TTTCTTCTTC TTCTGCTTCT TATGGTAGTG AAATTGAGCA 
500
GAGTCGTGAC TCTTTAATCC CTCTTCTTGT GAACGATTCT GAGGAAGAAG 
550
CTCAAATCGA GGATGCTATA CCAATAGAGG AATGGGAAAC ATGGTTGACT 
600
GATGATGGTG TTGATGAGCA GGTGAATCAT ATTATGAATA TGAAAGATGA 
650
TCGCAACAAC CACAGGCCTC AAAAGCCATT GACTGGTGTC TTGATTGACG 
700
ATAGTAGTGA TGATGATGAT GATTCTGATT TGCTATCTCC AACAACAAAT 
750
TCTATTGAAA ATTCGAGCAC TTGTGATAGT TTTGGTAGCT CAGACCAAAT 
800
CAACTTAGTG TCACTAACTC AAGAGGTGAG CCAAGCTCTG ATAACCAGTA 
850
TTGATACACC CGAGAAGATT AAGAGTCCTT ATGATGATGC ACAAGGGACT 
900
GGGGCTGGAG GGCAAAAATT GGGTCAAGAG ACTCGAGAGA AGAAACGAGC 
950
TGGTTTCTTT CACAGGATGA TACAAATATT CGTCAAGAAA ATTCACCAAT 
1000
GTTCTTCTAT CTCAAGAACA TAA
1050

>AT3G04420.2 longest ORF length:340
MENPVGLRFR PTDKEIVVDY LRPKNSDRDT SHVDRVISTV TIRSFDPWEL 
50
PCKIKLKDES WCFFSPKENK YGRGDQQIRK TKSGYWKITG KPKPILRNRQ 
100
EIGEKKVLMF YMSKELGGSK SDWVMHEYHA FSPTQMMMTY TICKVMFKGD 
150
VREISSSSAS YGSEIEQSRD SLIPLLVNDS EEEAQIEDAI PIEEWETWLT 
200
DDGVDEQVNH IMNMKDDRNN HRPQKPLTGV LIDDSSDDDD DSDLLSPTTN 
250
SIENSSTCDS FGSSDQINLV SLTQEVSQAL ITSIDTPEKI KSPYDDAQGT 
300
GAGGQKLGQE TREKKRAGFF HRMIQIFVKK IHQCSSISRT 
350