fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G04570 AHL19 AT-hook motif nuclear-localized protein 19 (.1)

>AT3G04570.1 CDS map

>>Show genomic map




Uncut enzymes: AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
ApaI GGGCC|C 633
BglII A|GATCT 84
HindIII A|AGCTT 911
NcoI C|CATGG 10, 110
StyI C|C[AT][AT]GG 10, 110, 828


Click here to view TAIR data

>AT3G04570.1 length:948
ATGGCGAATC CATGGTGGAC AGGACAAGTG AACCTATCCG GCCTCGAAAC 
50
GACGCCGCCT GGTTCCTCTC AGTTAAAGAA ACCAGATCTC CACATCTCCA 
100
TGAACATGGC CATGGACTCA GGTCACAATA ATCATCACCA TCACCAAGAA 
150
GTCGATAACA ACAACAACGA CGACGATAGA GACAACTTGA GTGGAGACGA 
200
CCACGAGCCA CGTGAAGGAG CCGTAGAAGC CCCCACGCGC CGTCCACGTG 
250
GACGTCCTGC TGGTTCCAAG AACAAACCAA AGCCACCGAT CTTCGTCACT 
300
CGCGATTCTC CAAATGCTCT CAAGAGCCAT GTCATGGAGA TCGCTAGTGG 
350
GACTGACGTC ATCGAAACCC TAGCTACTTT TGCTAGGCGG CGTCAACGTG 
400
GCATCTGCAT CTTGAGCGGA AATGGCACAG TGGCTAACGT CACCCTCCGT 
450
CAACCCTCGA CCGCTGCCGT TGCGGCGGCT CCTGGTGGTG CGGCTGTTTT 
500
GGCTTTACAA GGGAGGTTTG AGATTCTTTC TTTAACCGGT TCTTTCTTGC 
550
CAGGACCGGC TCCACCTGGT TCCACCGGTT TAACGATTTA CTTAGCCGGT 
600
GGTCAAGGTC AGGTTGTTGG AGGAAGCGTG GTGGGCCCAT TGATGGCAGC 
650
AGGTCCGGTG ATGCTGATCG CCGCCACGTT CTCTAACGCG ACTTACGAGA 
700
GATTGCCATT GGAGGAGGAA GAGGCAGCAG AGAGAGGCGG TGGTGGAGGC 
750
AGCGGAGGAG TGGTTCCGGG GCAGCTCGGA GGCGGAGGTT CGCCACTAAG 
800
CAGCGGTGCT GGTGGAGGCG ACGGTAACCA AGGACTTCCG GTGTATAATA 
850
TGCCGGGAAA TCTTGTTTCT AATGGTGGCA GTGGTGGAGG AGGACAGATG 
900
AGCGGCCAAG AAGCTTATGG TTGGGCTCAA GCTAGGTCAG GATTTTAA
950

>AT3G04570.1 longest ORF length:315
MANPWWTGQV NLSGLETTPP GSSQLKKPDL HISMNMAMDS GHNNHHHHQE 
50
VDNNNNDDDR DNLSGDDHEP REGAVEAPTR RPRGRPAGSK NKPKPPIFVT 
100
RDSPNALKSH VMEIASGTDV IETLATFARR RQRGICILSG NGTVANVTLR 
150
QPSTAAVAAA PGGAAVLALQ GRFEILSLTG SFLPGPAPPG STGLTIYLAG 
200
GQGQVVGGSV VGPLMAAGPV MLIAATFSNA TYERLPLEEE EAAERGGGGG 
250
SGGVVPGQLG GGGSPLSSGA GGGDGNQGLP VYNMPGNLVS NGGSGGGGQM 
300
SGQEAYGWAQ ARSGF
350