Locus |
Common name |
Short description |
AT3G04570 |
AHL19 |
AT-hook motif nuclear-localized protein 19 (.1) |
>AT3G04570.1 CDS map
>>Show genomic map
Uncut enzymes: AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
ApaI
| GGGCC|C |
633 |
BglII
| A|GATCT |
84 |
HindIII
| A|AGCTT |
911 |
NcoI
| C|CATGG |
10, 110 |
StyI
| C|C[AT][AT]GG |
10, 110, 828 |
Click here to view TAIR data
>AT3G04570.1 length:948
ATGGCGAATC CATGGTGGAC AGGACAAGTG AACCTATCCG GCCTCGAAAC | 50 |
GACGCCGCCT GGTTCCTCTC AGTTAAAGAA ACCAGATCTC CACATCTCCA | 100 |
TGAACATGGC CATGGACTCA GGTCACAATA ATCATCACCA TCACCAAGAA | 150 |
GTCGATAACA ACAACAACGA CGACGATAGA GACAACTTGA GTGGAGACGA | 200 |
CCACGAGCCA CGTGAAGGAG CCGTAGAAGC CCCCACGCGC CGTCCACGTG | 250 |
GACGTCCTGC TGGTTCCAAG AACAAACCAA AGCCACCGAT CTTCGTCACT | 300 |
CGCGATTCTC CAAATGCTCT CAAGAGCCAT GTCATGGAGA TCGCTAGTGG | 350 |
GACTGACGTC ATCGAAACCC TAGCTACTTT TGCTAGGCGG CGTCAACGTG | 400 |
GCATCTGCAT CTTGAGCGGA AATGGCACAG TGGCTAACGT CACCCTCCGT | 450 |
CAACCCTCGA CCGCTGCCGT TGCGGCGGCT CCTGGTGGTG CGGCTGTTTT | 500 |
GGCTTTACAA GGGAGGTTTG AGATTCTTTC TTTAACCGGT TCTTTCTTGC | 550 |
CAGGACCGGC TCCACCTGGT TCCACCGGTT TAACGATTTA CTTAGCCGGT | 600 |
GGTCAAGGTC AGGTTGTTGG AGGAAGCGTG GTGGGCCCAT TGATGGCAGC | 650 |
AGGTCCGGTG ATGCTGATCG CCGCCACGTT CTCTAACGCG ACTTACGAGA | 700 |
GATTGCCATT GGAGGAGGAA GAGGCAGCAG AGAGAGGCGG TGGTGGAGGC | 750 |
AGCGGAGGAG TGGTTCCGGG GCAGCTCGGA GGCGGAGGTT CGCCACTAAG | 800 |
CAGCGGTGCT GGTGGAGGCG ACGGTAACCA AGGACTTCCG GTGTATAATA | 850 |
TGCCGGGAAA TCTTGTTTCT AATGGTGGCA GTGGTGGAGG AGGACAGATG | 900 |
AGCGGCCAAG AAGCTTATGG TTGGGCTCAA GCTAGGTCAG GATTTTAA | 950 |
>AT3G04570.1 longest ORF length:315
MANPWWTGQV NLSGLETTPP GSSQLKKPDL HISMNMAMDS GHNNHHHHQE | 50 |
VDNNNNDDDR DNLSGDDHEP REGAVEAPTR RPRGRPAGSK NKPKPPIFVT | 100 |
RDSPNALKSH VMEIASGTDV IETLATFARR RQRGICILSG NGTVANVTLR | 150 |
QPSTAAVAAA PGGAAVLALQ GRFEILSLTG SFLPGPAPPG STGLTIYLAG | 200 |
GQGQVVGGSV VGPLMAAGPV MLIAATFSNA TYERLPLEEE EAAERGGGGG | 250 |
SGGVVPGQLG GGGSPLSSGA GGGDGNQGLP VYNMPGNLVS NGGSGGGGQM | 300 |
SGQEAYGWAQ ARSGF | 350 |
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