fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G04730 IAA16 indoleacetic acid-induced protein 16 (.1)

>AT3G04730.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 429
NdeI CA|TATG 560
StyI C|C[AT][AT]GG 200, 676


Click here to view TAIR data

>AT3G04730.1 length:711
ATGATTAATT TTGAGGCCAC GGAGCTGAGA TTAGGGCTAC CGGGTGGGAA 
50
TCACGGAGGA GAAATGGCTG GAAAAAATAA TGGTAAAAGA GGATTTTCTG 
100
AGACTGTTGA TCTCAAACTG AATCTTTCAT CGACGGCTAT GGATTCAGTT 
150
TCCAAAGTCG ATTTAGAGAA TATGAAGGAG AAGGTCGTAA AACCACCAGC 
200
CAAGGCACAA GTTGTGGGAT GGCCACCGGT ACGATCTTTC CGCAAGAACG 
250
TCATGTCCGG CCAAAAACCG ACCACCGGAG ATGCCACCGA AGGAAACGAT 
300
AAGACTTCTG GCAGCAGTGG AGCCACCTCA TCCGCCTCCG CATGTGCCAC 
350
CGTGGCTTAT GTGAAGGTTA GCATGGACGG TGCACCGTAC CTACGGAAAA 
400
TTGACTTGAA ACTCTACAAA ACTTACCAAG ATCTCTCCAA CGCCTTAAGC 
450
AAAATGTTTA GCTCTTTTAC CATAGGCAAC TATGGACCAC AAGGAATGAA 
500
AGATTTCATG AATGAGAGTA AATTGATCGA TCTTCTAAAC GGATCAGATT 
550
ATGTTCCAAC ATATGAAGAT AAAGATGGCG ACTGGATGCT TGTAGGAGAC 
600
GTACCGTGGG AGATGTTTGT TGATTCATGC AAACGTATAC GAATAATGAA 
650
GGGATCAGAA GCAATCGGAC TTGCTCCAAG GGCATTAGAA AAGTGCAAGA 
700
ACAGAAGTTG A
750

>AT3G04730.1 longest ORF length:236
MINFEATELR LGLPGGNHGG EMAGKNNGKR GFSETVDLKL NLSSTAMDSV 
50
SKVDLENMKE KVVKPPAKAQ VVGWPPVRSF RKNVMSGQKP TTGDATEGND 
100
KTSGSSGATS SASACATVAY VKVSMDGAPY LRKIDLKLYK TYQDLSNALS 
150
KMFSSFTIGN YGPQGMKDFM NESKLIDLLN GSDYVPTYED KDGDWMLVGD 
200
VPWEMFVDSC KRIRIMKGSE AIGLAPRALE KCKNRS
250