Locus |
Common name |
Short description |
AT3G04730 |
IAA16 |
indoleacetic acid-induced protein 16 (.1) |
>AT3G04730.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
429 |
NdeI
| CA|TATG |
560 |
StyI
| C|C[AT][AT]GG |
200, 676 |
Click here to view TAIR data
>AT3G04730.1 length:711
ATGATTAATT TTGAGGCCAC GGAGCTGAGA TTAGGGCTAC CGGGTGGGAA | 50 |
TCACGGAGGA GAAATGGCTG GAAAAAATAA TGGTAAAAGA GGATTTTCTG | 100 |
AGACTGTTGA TCTCAAACTG AATCTTTCAT CGACGGCTAT GGATTCAGTT | 150 |
TCCAAAGTCG ATTTAGAGAA TATGAAGGAG AAGGTCGTAA AACCACCAGC | 200 |
CAAGGCACAA GTTGTGGGAT GGCCACCGGT ACGATCTTTC CGCAAGAACG | 250 |
TCATGTCCGG CCAAAAACCG ACCACCGGAG ATGCCACCGA AGGAAACGAT | 300 |
AAGACTTCTG GCAGCAGTGG AGCCACCTCA TCCGCCTCCG CATGTGCCAC | 350 |
CGTGGCTTAT GTGAAGGTTA GCATGGACGG TGCACCGTAC CTACGGAAAA | 400 |
TTGACTTGAA ACTCTACAAA ACTTACCAAG ATCTCTCCAA CGCCTTAAGC | 450 |
AAAATGTTTA GCTCTTTTAC CATAGGCAAC TATGGACCAC AAGGAATGAA | 500 |
AGATTTCATG AATGAGAGTA AATTGATCGA TCTTCTAAAC GGATCAGATT | 550 |
ATGTTCCAAC ATATGAAGAT AAAGATGGCG ACTGGATGCT TGTAGGAGAC | 600 |
GTACCGTGGG AGATGTTTGT TGATTCATGC AAACGTATAC GAATAATGAA | 650 |
GGGATCAGAA GCAATCGGAC TTGCTCCAAG GGCATTAGAA AAGTGCAAGA | 700 |
ACAGAAGTTG A | 750 |
>AT3G04730.1 longest ORF length:236
MINFEATELR LGLPGGNHGG EMAGKNNGKR GFSETVDLKL NLSSTAMDSV | 50 |
SKVDLENMKE KVVKPPAKAQ VVGWPPVRSF RKNVMSGQKP TTGDATEGND | 100 |
KTSGSSGATS SASACATVAY VKVSMDGAPY LRKIDLKLYK TYQDLSNALS | 150 |
KMFSSFTIGN YGPQGMKDFM NESKLIDLLN GSDYVPTYED KDGDWMLVGD | 200 |
VPWEMFVDSC KRIRIMKGSE AIGLAPRALE KCKNRS | 250 |
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