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| Locus | Common name | Short description |
| AT3G05380 | ALY2, ATALY2 | ARABIDOPSIS THALIANA ALWAYS EARLY 2, ALWAYS EARLY 2, DIRP ;Myb-like DNA-binding domain (.1.2.3.4.5) |
>AT3G05380.2 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, SacI, SalI, SmaI, XbaI, XhoI
| Name | Recognition sequence | Cut positions |
| BglII | A|GATCT | 1813 |
| HindIII | A|AGCTT | 1755, 1849, 3057 |
| PstI | CTGCA|G | 1747 |
| PvuII | CAG|CTG | 3020 |
| SpeI | A|CTAGT | 1429, 2536 |
| StyI | C|C[AT][AT]GG | 388, 2415 |
Click here to view TAIR data
>AT3G05380.2 length:3159
ATGGCACCAG TTAGGAAGTC GAGGAGTGTG AACAAGCGTT TCACCAATGA | 50 |
AACTTCCCCA AGAAAAGATG CTGGGAAATC GAAAAAAAAT AAGCTACGTA | 100 |
AGAAGAAATT GTCTGACAAG CTGGGACCTC AGTGGACCAG ATTAGAACTT | 150 |
GAGCGTTTCT ATGATGCTTA CCGCAAGCAC GGACAAGAGT GGAGAAGGGT | 200 |
GGCTGCTGCA ATTCGGAATA GCAGGTCTGT TGACATGGTG GAAGCTCTAT | 250 |
TTAATATGAA TCGGGCGTAT TTATCTCTCC CCGAGGGAAC TGCCTCTGTA | 300 |
GCTGGCCTTA TTGCGATGAT GACAGATCAT TACAGTGTCA TGGAAGGGAG | 350 |
TGGCAGTGAA GGAGAAGGCC ATGATGCTTC AGAAGTACCA AGGAAACAAC | 400 |
AAAAGCGCAA ACGTGCTAAA CCTCAACGTA GCGATTCTCC AGAGGAAGTG | 450 |
GATATACAAC AGTCAATTGG TTCACCAGAT GGATGCCTCA CGTTTTTGAA | 500 |
GCAAGCACGA GCTAATGGAA CTCAGCGACA TGCCACTGGA AAACGTACAC | 550 |
CACGGGTTCC TGTACAAACT TCATTTATGA GGGATGATAG AGAAGGCTCT | 600 |
ACTCCACCAA ATAAAAGAGC CAGGAAGCAA TTCGATGCCA ATGATGATGT | 650 |
AGCACATTTT TTAGCGTTAG CATTAACAGA TGCATCGAGA AGGGGAGGGT | 700 |
CTCCAAAAGT TTCTGAATCA CCAAATAGAA GAACAGAACT TAGCGATAGC | 750 |
TCACCGATAA AGAGCTGGGG GAAAATGTCG CGAACCAGAA AATCTCAGTC | 800 |
TAAGCACTGT GGCAGCTCCA TTTTCGAGGA GTGGATGGAA AGTAGCCGAG | 850 |
AAAGGAAACT TGACTCTGAT AAAGATACTA CCTTGTTGAT GGATATGGAA | 900 |
AGGGCTGGCG AAATGGAGGC TCCGCGGAAG GGGAAAAGAG TCTACAAGAA | 950 |
AAGAGTGAAA GTCGAAGAAG CAGAATGTAA TGATTCTGAT GACAATGGAG | 1000 |
AAGCATGCAG TGCCACACAA GGGCTCAGAA GTAAATCACA AAGACGAAAG | 1050 |
GCTGCTATTG AAGCCTCAAG AGAGAAATAC TCACCGCGCA GCCCAAAGAA | 1100 |
AAGAGATGAC AAACATACTT CCGGAGCTTT TGATGCCCTG CAAGCATTGG | 1150 |
CCGAATTGTC AGCTTCAATG CTTCCAGCAA ATTTGATGGA GTCAGAATTA | 1200 |
TCTGCTCAGT TGAAGGAAGA AAGAACAGAA TACGACATGG ACGAGAAATC | 1250 |
TAGCACACCA GAAGCTACTT CCACAAGCAG TCATGGGGAA AAAGCAAATG | 1300 |
TAGAGCCAGA TGATAGTCTC CTTCATGCAA TTTCTTCTGT TGAGAATGCT | 1350 |
AACAAGAGAA AGTCAAAACC TTCAAGGCTG GTATCCACTG ATTGTGATGA | 1400 |
TGTTCCCACA GGGAAGCTAC AACCACAAAC TAGTGGCAGT TTAAGAAAAC | 1450 |
GTAAACCAAA GGTACTAGGG GATGAAGCTC CAGCAGAGTT TAGTCAGAAC | 1500 |
AAATCCATAA ACAAGAAGGA ATTGCCTCAA GATGAGAATA ATATGAAGTC | 1550 |
TTTGGTTAAA ACAAAACGCG CTGGTCAAGT TCCGGCTCAG TCAAAACAGA | 1600 |
TGAAAACTGT TAAGGCGTTG GAGGAATCTG CTATAACAAG TGATAAGAAA | 1650 |
AGACCTGGGA TGGATATAGT AGCGTCACCT AAACAAGTTT CTGACTCGGG | 1700 |
TCCAACCAGT TTATCGCAGA AACCTCCAAA CAGGCGAAAG AAGAGTCTGC | 1750 |
AGAAAAGCTT ACAAGAAAAG GCTAAATCTT CTGAAACCAC TCATAAAGCT | 1800 |
GCACGTAGTT CCAGATCTCT TTCAGAACAA GAGTTGTTGT TAAAGGATAA | 1850 |
GCTTGCTACT TCTCTGTCGT TTCCCTTTGC ACGTCGAAGG TGCATATTTG | 1900 |
AATGGTTTTA TAGTGCTATC GACCATCCCT GGTTTTCAAA GATGGAGTTT | 1950 |
GTCGATTACC TAAATCACGT GGGGCTTGGT CACATTCCAA GACTTACTCG | 2000 |
TCTTGAATGG AGCGTCATTA AAAGTTCTCT TGGTAGACCA CGAAGATTCT | 2050 |
CTGAGAGATT TTTACATGAA GAGCGGGAGA AACTTAAACA GTACCGCGAA | 2100 |
TCTGTGCGAA AGCATTATAC AGAGCTTCGA ACGGGTGCTA GGGAGGGGCT | 2150 |
TCCTACAGAT TTGGCTCGGC CATTAGCAGT TGGGAACAGA GTCATTGCCA | 2200 |
TCCATCCCAA AACACGGGAG ATTCATGATG GAAAAATTCT CACTGTTGAT | 2250 |
CATAACAAAT GCAATGTTCT CTTCGATGAC TTGGGCGTTG AGTTGGTTAT | 2300 |
GGACATTGAT TGCATGCCTT TAAATCCACT GGAATACATG CCAGAGGGTC | 2350 |
TAAGGAGGCA AATTGATAAG TGCTTGTCTA TGAAGAAAGA AGCACAGCTA | 2400 |
AGCGGGAATA CAAACCTTGG TGTGTCTGTG CTATTCCCTC CTTGCGGACT | 2450 |
TGAAAATGTC AGCTTTTCCA TGAATCCTCC TCTGAATCAG GGTGATATGA | 2500 |
TTGCTCCCAT TCTGCATGGT AAAGTATCAA GCAACACTAG TAGTCCACGG | 2550 |
CAGACTAATC ATTCATATAT CACAACTTAT AACAAAGCAA AAGAAGCTGA | 2600 |
GATTCAACGG GCACAAGCGC TACAGCATGC TTTAGATGAA AAGGAAATGG | 2650 |
AGCCAGAGAT GCTAGAAATT GTCAAGGGTT CAAAAACAAG AGCGCAAGCA | 2700 |
ATGGTGGATG CAGCTATAAA GGCTGCATCA TCTGTGAAGG AAGGGGAAGA | 2750 |
TGTGAACACA ATGATCCAAG AAGCCTTAGA GTTGGTTGGC AAAAATCAGC | 2800 |
TATTACGCAG CTCTATGGTC AAACATCACG AGCATGTAAA TGGCAGTATA | 2850 |
GAGCATCATC ACAACCCATC TCCTTCAAAT GGATCAGAGC CTGTGGCTAA | 2900 |
CAACGATTTA AACTCACAAG ATGGTTCAGA GAAAAACGCT CAAATGCCTT | 2950 |
CAGAGCTTAT CACCTCCTGT GTTGCCACTT GGCTCATGAT TCAGATGTGC | 3000 |
ACGGAGAGAC AGTACCCTCC AGCTGATGTC GCACAGCTTA TAGACGCAGC | 3050 |
AGTCACAAGC TTGCAGCCAC GATGCCCACA GAACCTACCG ATCTACAGAG | 3100 |
AAATCCAAAC GTGCATGGGA CGGATCAAGA CTCAAATCAT GTCCCTTGTA | 3150 |
CCAACTTGA | 3200 |
>AT3G05380.2 longest ORF length:1052
MAPVRKSRSV NKRFTNETSP RKDAGKSKKN KLRKKKLSDK LGPQWTRLEL | 50 |
ERFYDAYRKH GQEWRRVAAA IRNSRSVDMV EALFNMNRAY LSLPEGTASV | 100 |
AGLIAMMTDH YSVMEGSGSE GEGHDASEVP RKQQKRKRAK PQRSDSPEEV | 150 |
DIQQSIGSPD GCLTFLKQAR ANGTQRHATG KRTPRVPVQT SFMRDDREGS | 200 |
TPPNKRARKQ FDANDDVAHF LALALTDASR RGGSPKVSES PNRRTELSDS | 250 |
SPIKSWGKMS RTRKSQSKHC GSSIFEEWME SSRERKLDSD KDTTLLMDME | 300 |
RAGEMEAPRK GKRVYKKRVK VEEAECNDSD DNGEACSATQ GLRSKSQRRK | 350 |
AAIEASREKY SPRSPKKRDD KHTSGAFDAL QALAELSASM LPANLMESEL | 400 |
SAQLKEERTE YDMDEKSSTP EATSTSSHGE KANVEPDDSL LHAISSVENA | 450 |
NKRKSKPSRL VSTDCDDVPT GKLQPQTSGS LRKRKPKVLG DEAPAEFSQN | 500 |
KSINKKELPQ DENNMKSLVK TKRAGQVPAQ SKQMKTVKAL EESAITSDKK | 550 |
RPGMDIVASP KQVSDSGPTS LSQKPPNRRK KSLQKSLQEK AKSSETTHKA | 600 |
ARSSRSLSEQ ELLLKDKLAT SLSFPFARRR CIFEWFYSAI DHPWFSKMEF | 650 |
VDYLNHVGLG HIPRLTRLEW SVIKSSLGRP RRFSERFLHE EREKLKQYRE | 700 |
SVRKHYTELR TGAREGLPTD LARPLAVGNR VIAIHPKTRE IHDGKILTVD | 750 |
HNKCNVLFDD LGVELVMDID CMPLNPLEYM PEGLRRQIDK CLSMKKEAQL | 800 |
SGNTNLGVSV LFPPCGLENV SFSMNPPLNQ GDMIAPILHG KVSSNTSSPR | 850 |
QTNHSYITTY NKAKEAEIQR AQALQHALDE KEMEPEMLEI VKGSKTRAQA | 900 |
MVDAAIKAAS SVKEGEDVNT MIQEALELVG KNQLLRSSMV KHHEHVNGSI | 950 |
EHHHNPSPSN GSEPVANNDL NSQDGSEKNA QMPSELITSC VATWLMIQMC | 1000 |
TERQYPPADV AQLIDAAVTS LQPRCPQNLP IYREIQTCMG RIKTQIMSLV | 1050 |
PT | 1100 |