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| Locus | Common name | Short description |
| AT3G05380 | ALY2, ATALY2 | ARABIDOPSIS THALIANA ALWAYS EARLY 2, ALWAYS EARLY 2, DIRP ;Myb-like DNA-binding domain (.1.2.3.4.5) |
>AT3G05380.3 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, SacI, SalI, SmaI, XbaI, XhoI
| Name | Recognition sequence | Cut positions |
| BglII | A|GATCT | 1579 |
| HindIII | A|AGCTT | 1521, 1615, 2823 |
| PstI | CTGCA|G | 1513 |
| PvuII | CAG|CTG | 2786 |
| SpeI | A|CTAGT | 1195, 2302 |
| StyI | C|C[AT][AT]GG | 154, 2181 |
Click here to view TAIR data
>AT3G05380.3 length:2925
ATGGTGGAAG CTCTATTTAA TATGAATCGG GCGTATTTAT CTCTCCCCGA | 50 |
GGGAACTGCC TCTGTAGCTG GCCTTATTGC GATGATGACA GATCATTACA | 100 |
GTGTCATGGA AGGGAGTGGC AGTGAAGGAG AAGGCCATGA TGCTTCAGAA | 150 |
GTACCAAGGA AACAACAAAA GCGCAAACGT GCTAAACCTC AACGTAGCGA | 200 |
TTCTCCAGAG GAAGTGGATA TACAACAGTC AATTGGTTCA CCAGATGGAT | 250 |
GCCTCACGTT TTTGAAGCAA GCACGAGCTA ATGGAACTCA GCGACATGCC | 300 |
ACTGGAAAAC GTACACCACG GGTTCCTGTA CAAACTTCAT TTATGAGGGA | 350 |
TGATAGAGAA GGCTCTACTC CACCAAATAA AAGAGCCAGG AAGCAATTCG | 400 |
ATGCCAATGA TGATGTAGCA CATTTTTTAG CGTTAGCATT AACAGATGCA | 450 |
TCGAGAAGGG GAGGGTCTCC AAAAGTTTCT GAATCACCAA ATAGAAGAAC | 500 |
AGAACTTAGC GATAGCTCAC CGATAAAGAG CTGGGGGAAA ATGTCGCGAA | 550 |
CCAGAAAATC TCAGTCTAAG CACTGTGGCA GCTCCATTTT CGAGGAGTGG | 600 |
ATGGAAAGTA GCCGAGAAAG GAAACTTGAC TCTGATAAAG ATACTACCTT | 650 |
GTTGATGGAT ATGGAAAGGG CTGGCGAAAT GGAGGCTCCG CGGAAGGGGA | 700 |
AAAGAGTCTA CAAGAAAAGA GTGAAAGTCG AAGAAGCAGA ATGTAATGAT | 750 |
TCTGATGACA ATGGAGAAGC ATGCAGTGCC ACACAAGGGC TCAGAAGTAA | 800 |
ATCACAAAGA CGAAAGGCTG CTATTGAAGC CTCAAGAGAG AAATACTCAC | 850 |
CGCGCAGCCC AAAGAAAAGA GATGACAAAC ATACTTCCGG AGCTTTTGAT | 900 |
GCCCTGCAAG CATTGGCCGA ATTGTCAGCT TCAATGCTTC CAGCAAATTT | 950 |
GATGGAGTCA GAATTATCTG CTCAGTTGAA GGAAGAAAGA ACAGAATACG | 1000 |
ACATGGACGA GAAATCTAGC ACACCAGAAG CTACTTCCAC AAGCAGTCAT | 1050 |
GGGGAAAAAG CAAATGTAGA GCCAGATGAT AGTCTCCTTC ATGCAATTTC | 1100 |
TTCTGTTGAG AATGCTAACA AGAGAAAGTC AAAACCTTCA AGGCTGGTAT | 1150 |
CCACTGATTG TGATGATGTT CCCACAGGGA AGCTACAACC ACAAACTAGT | 1200 |
GGCAGTTTAA GAAAACGTAA ACCAAAGGTA CTAGGGGATG AAGCTCCAGC | 1250 |
AGAGTTTAGT CAGAACAAAT CCATAAACAA GAAGGAATTG CCTCAAGATG | 1300 |
AGAATAATAT GAAGTCTTTG GTTAAAACAA AACGCGCTGG TCAAGTTCCG | 1350 |
GCTCAGTCAA AACAGATGAA AACTGTTAAG GCGTTGGAGG AATCTGCTAT | 1400 |
AACAAGTGAT AAGAAAAGAC CTGGGATGGA TATAGTAGCG TCACCTAAAC | 1450 |
AAGTTTCTGA CTCGGGTCCA ACCAGTTTAT CGCAGAAACC TCCAAACAGG | 1500 |
CGAAAGAAGA GTCTGCAGAA AAGCTTACAA GAAAAGGCTA AATCTTCTGA | 1550 |
AACCACTCAT AAAGCTGCAC GTAGTTCCAG ATCTCTTTCA GAACAAGAGT | 1600 |
TGTTGTTAAA GGATAAGCTT GCTACTTCTC TGTCGTTTCC CTTTGCACGT | 1650 |
CGAAGGTGCA TATTTGAATG GTTTTATAGT GCTATCGACC ATCCCTGGTT | 1700 |
TTCAAAGATG GAGTTTGTCG ATTACCTAAA TCACGTGGGG CTTGGTCACA | 1750 |
TTCCAAGACT TACTCGTCTT GAATGGAGCG TCATTAAAAG TTCTCTTGGT | 1800 |
AGACCACGAA GATTCTCTGA GAGATTTTTA CATGAAGAGC GGGAGAAACT | 1850 |
TAAACAGTAC CGCGAATCTG TGCGAAAGCA TTATACAGAG CTTCGAACGG | 1900 |
GTGCTAGGGA GGGGCTTCCT ACAGATTTGG CTCGGCCATT AGCAGTTGGG | 1950 |
AACAGAGTCA TTGCCATCCA TCCCAAAACA CGGGAGATTC ATGATGGAAA | 2000 |
AATTCTCACT GTTGATCATA ACAAATGCAA TGTTCTCTTC GATGACTTGG | 2050 |
GCGTTGAGTT GGTTATGGAC ATTGATTGCA TGCCTTTAAA TCCACTGGAA | 2100 |
TACATGCCAG AGGGTCTAAG GAGGCAAATT GATAAGTGCT TGTCTATGAA | 2150 |
GAAAGAAGCA CAGCTAAGCG GGAATACAAA CCTTGGTGTG TCTGTGCTAT | 2200 |
TCCCTCCTTG CGGACTTGAA AATGTCAGCT TTTCCATGAA TCCTCCTCTG | 2250 |
AATCAGGGTG ATATGATTGC TCCCATTCTG CATGGTAAAG TATCAAGCAA | 2300 |
CACTAGTAGT CCACGGCAGA CTAATCATTC ATATATCACA ACTTATAACA | 2350 |
AAGCAAAAGA AGCTGAGATT CAACGGGCAC AAGCGCTACA GCATGCTTTA | 2400 |
GATGAAAAGG AAATGGAGCC AGAGATGCTA GAAATTGTCA AGGGTTCAAA | 2450 |
AACAAGAGCG CAAGCAATGG TGGATGCAGC TATAAAGGCT GCATCATCTG | 2500 |
TGAAGGAAGG GGAAGATGTG AACACAATGA TCCAAGAAGC CTTAGAGTTG | 2550 |
GTTGGCAAAA ATCAGCTATT ACGCAGCTCT ATGGTCAAAC ATCACGAGCA | 2600 |
TGTAAATGGC AGTATAGAGC ATCATCACAA CCCATCTCCT TCAAATGGAT | 2650 |
CAGAGCCTGT GGCTAACAAC GATTTAAACT CACAAGATGG TTCAGAGAAA | 2700 |
AACGCTCAAA TGCCTTCAGA GCTTATCACC TCCTGTGTTG CCACTTGGCT | 2750 |
CATGATTCAG ATGTGCACGG AGAGACAGTA CCCTCCAGCT GATGTCGCAC | 2800 |
AGCTTATAGA CGCAGCAGTC ACAAGCTTGC AGCCACGATG CCCACAGAAC | 2850 |
CTACCGATCT ACAGAGAAAT CCAAACGTGC ATGGGACGGA TCAAGACTCA | 2900 |
AATCATGTCC CTTGTACCAA CTTGA | 2950 |
>AT3G05380.3 longest ORF length:974
MVEALFNMNR AYLSLPEGTA SVAGLIAMMT DHYSVMEGSG SEGEGHDASE | 50 |
VPRKQQKRKR AKPQRSDSPE EVDIQQSIGS PDGCLTFLKQ ARANGTQRHA | 100 |
TGKRTPRVPV QTSFMRDDRE GSTPPNKRAR KQFDANDDVA HFLALALTDA | 150 |
SRRGGSPKVS ESPNRRTELS DSSPIKSWGK MSRTRKSQSK HCGSSIFEEW | 200 |
MESSRERKLD SDKDTTLLMD MERAGEMEAP RKGKRVYKKR VKVEEAECND | 250 |
SDDNGEACSA TQGLRSKSQR RKAAIEASRE KYSPRSPKKR DDKHTSGAFD | 300 |
ALQALAELSA SMLPANLMES ELSAQLKEER TEYDMDEKSS TPEATSTSSH | 350 |
GEKANVEPDD SLLHAISSVE NANKRKSKPS RLVSTDCDDV PTGKLQPQTS | 400 |
GSLRKRKPKV LGDEAPAEFS QNKSINKKEL PQDENNMKSL VKTKRAGQVP | 450 |
AQSKQMKTVK ALEESAITSD KKRPGMDIVA SPKQVSDSGP TSLSQKPPNR | 500 |
RKKSLQKSLQ EKAKSSETTH KAARSSRSLS EQELLLKDKL ATSLSFPFAR | 550 |
RRCIFEWFYS AIDHPWFSKM EFVDYLNHVG LGHIPRLTRL EWSVIKSSLG | 600 |
RPRRFSERFL HEEREKLKQY RESVRKHYTE LRTGAREGLP TDLARPLAVG | 650 |
NRVIAIHPKT REIHDGKILT VDHNKCNVLF DDLGVELVMD IDCMPLNPLE | 700 |
YMPEGLRRQI DKCLSMKKEA QLSGNTNLGV SVLFPPCGLE NVSFSMNPPL | 750 |
NQGDMIAPIL HGKVSSNTSS PRQTNHSYIT TYNKAKEAEI QRAQALQHAL | 800 |
DEKEMEPEML EIVKGSKTRA QAMVDAAIKA ASSVKEGEDV NTMIQEALEL | 850 |
VGKNQLLRSS MVKHHEHVNG SIEHHHNPSP SNGSEPVANN DLNSQDGSEK | 900 |
NAQMPSELIT SCVATWLMIQ MCTERQYPPA DVAQLIDAAV TSLQPRCPQN | 950 |
LPIYREIQTC MGRIKTQIMS LVPT | 1000 |