Locus |
Common name |
Short description |
AT3G05690 |
NF-YA2, ATHAP2B, HAP2B, UNE8 |
UNFERTILIZED EMBRYO SAC 8, "nuclear factor Y, subunit A2", HEME ACTIVATOR PROTEIN \(YEAST\) HOMOLOG 2B, HEME ACTIVATOR PROTEIN \(YEAST\) HOMOLOG 2B, nuclear factor Y, subunit A2 (.1) |
>AT3G05690.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BglII, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BamHI
| G|GATCC |
568 |
EcoRI
| G|AATTC |
693 |
NcoI
| C|CATGG |
435 |
StyI
| C|C[AT][AT]GG |
435 |
Click here to view TAIR data
>AT3G05690.1 length:888
ATGGCTATGC AAACTGTGAG AGAAGGTCTC TTCTCTGCTC CACAGACTTC | 50 |
TTGGTGGACT GCTTTTGGAT CTCAGCCGTT GGCTCCGGAG AGTCTCGCCG | 100 |
GCGATTCTGA CTCATTCGCC GGAGTTAAGG TCGGATCTGT CGGAGAGACA | 150 |
GGACAACGTG TGGATAAACA GAGCAACTCT GCAACGCACT TAGCTTTCTC | 200 |
ACTTGGTGAT GTAAAGAGTC CAAGACTTGT GCCAAAGCCT CATGGAGCTA | 250 |
CTTTCTCAAT GCAATCACCT TGCTTGGAAC TTGGATTTTC TCAGCCACCG | 300 |
ATCTATACAA AGTATCCCTA TGGAGAACAA CAATACTATG GAGTTGTTTC | 350 |
AGCCTATGGA TCTCAGAGCA GGGTAATGCT TCCTCTAAAC ATGGAAACGG | 400 |
AAGATAGTAC CATCTATGTG AACTCAAAGC AATACCATGG AATCATAAGG | 450 |
AGACGCCAAT CCCGCGCAAA GGCTGCTGCT GTTCTTGATC AGAAGAAATT | 500 |
GAGTAGTAGA TGCCGCAAGC CATATATGCA TCATTCGCGC CATCTCCATG | 550 |
CATTGCGGCG TCCTAGAGGA TCCGGTGGGA GATTCTTGAA CACTAAAAGT | 600 |
CAGAACTTGG AAAATAGCGG AACCAATGCA AAGAAAGGTG ATGGAAGTAT | 650 |
GCAGATTCAG TCTCAGCCTA AGCCTCAGCA AAGTAACTCT CAGAATTCTG | 700 |
AAGTTGTTCA TCCGGAAAAC GGGACCATGA ACTTATCGAA CGGATTAAAT | 750 |
GTGTCGGGAT CAGAAGTTAC TAGCATGAAC TACTTCCTAA GTTCTCCCGT | 800 |
TCATTCTCTT GGTGGCATGG TAATGCCTAG CAAGTGGATA GCAGCAGCAG | 850 |
CAGCAATGGA TAATGGCTGC TGCAATTTCA AAACCTGA | 900 |
>AT3G05690.1 longest ORF length:295
MAMQTVREGL FSAPQTSWWT AFGSQPLAPE SLAGDSDSFA GVKVGSVGET | 50 |
GQRVDKQSNS ATHLAFSLGD VKSPRLVPKP HGATFSMQSP CLELGFSQPP | 100 |
IYTKYPYGEQ QYYGVVSAYG SQSRVMLPLN METEDSTIYV NSKQYHGIIR | 150 |
RRQSRAKAAA VLDQKKLSSR CRKPYMHHSR HLHALRRPRG SGGRFLNTKS | 200 |
QNLENSGTNA KKGDGSMQIQ SQPKPQQSNS QNSEVVHPEN GTMNLSNGLN | 250 |
VSGSEVTSMN YFLSSPVHSL GGMVMPSKWI AAAAAMDNGC CNFKT | 300 |
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