fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G05690 NF-YA2, ATHAP2B, HAP2B, UNE8 UNFERTILIZED EMBRYO SAC 8, "nuclear factor Y, subunit A2", HEME ACTIVATOR PROTEIN \(YEAST\) HOMOLOG 2B, HEME ACTIVATOR PROTEIN \(YEAST\) HOMOLOG 2B, nuclear factor Y, subunit A2 (.1)

>AT3G05690.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 568
EcoRI G|AATTC 693
NcoI C|CATGG 435
StyI C|C[AT][AT]GG 435


Click here to view TAIR data

>AT3G05690.1 length:888
ATGGCTATGC AAACTGTGAG AGAAGGTCTC TTCTCTGCTC CACAGACTTC 
50
TTGGTGGACT GCTTTTGGAT CTCAGCCGTT GGCTCCGGAG AGTCTCGCCG 
100
GCGATTCTGA CTCATTCGCC GGAGTTAAGG TCGGATCTGT CGGAGAGACA 
150
GGACAACGTG TGGATAAACA GAGCAACTCT GCAACGCACT TAGCTTTCTC 
200
ACTTGGTGAT GTAAAGAGTC CAAGACTTGT GCCAAAGCCT CATGGAGCTA 
250
CTTTCTCAAT GCAATCACCT TGCTTGGAAC TTGGATTTTC TCAGCCACCG 
300
ATCTATACAA AGTATCCCTA TGGAGAACAA CAATACTATG GAGTTGTTTC 
350
AGCCTATGGA TCTCAGAGCA GGGTAATGCT TCCTCTAAAC ATGGAAACGG 
400
AAGATAGTAC CATCTATGTG AACTCAAAGC AATACCATGG AATCATAAGG 
450
AGACGCCAAT CCCGCGCAAA GGCTGCTGCT GTTCTTGATC AGAAGAAATT 
500
GAGTAGTAGA TGCCGCAAGC CATATATGCA TCATTCGCGC CATCTCCATG 
550
CATTGCGGCG TCCTAGAGGA TCCGGTGGGA GATTCTTGAA CACTAAAAGT 
600
CAGAACTTGG AAAATAGCGG AACCAATGCA AAGAAAGGTG ATGGAAGTAT 
650
GCAGATTCAG TCTCAGCCTA AGCCTCAGCA AAGTAACTCT CAGAATTCTG 
700
AAGTTGTTCA TCCGGAAAAC GGGACCATGA ACTTATCGAA CGGATTAAAT 
750
GTGTCGGGAT CAGAAGTTAC TAGCATGAAC TACTTCCTAA GTTCTCCCGT 
800
TCATTCTCTT GGTGGCATGG TAATGCCTAG CAAGTGGATA GCAGCAGCAG 
850
CAGCAATGGA TAATGGCTGC TGCAATTTCA AAACCTGA
900

>AT3G05690.1 longest ORF length:295
MAMQTVREGL FSAPQTSWWT AFGSQPLAPE SLAGDSDSFA GVKVGSVGET 
50
GQRVDKQSNS ATHLAFSLGD VKSPRLVPKP HGATFSMQSP CLELGFSQPP 
100
IYTKYPYGEQ QYYGVVSAYG SQSRVMLPLN METEDSTIYV NSKQYHGIIR 
150
RRQSRAKAAA VLDQKKLSSR CRKPYMHHSR HLHALRRPRG SGGRFLNTKS 
200
QNLENSGTNA KKGDGSMQIQ SQPKPQQSNS QNSEVVHPEN GTMNLSNGLN 
250
VSGSEVTSMN YFLSSPVHSL GGMVMPSKWI AAAAAMDNGC CNFKT
300