fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G05760 C2H2 and C2HC zinc fingers superfamily protein (.1.2)

>AT3G05760.1 CDS map

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Uncut enzymes: ApaI, AscI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 549
BglII A|GATCT 432


Click here to view TAIR data

>AT3G05760.1 length:609
ATGGCTTCGA GCAACACGAC TACTGGGGTT GATAATACGT TTAGAAAGAA 
50
GTTTGATGTG GAAGAGTTTA AGGAGCGTGC TCGTGAACGC GAAAAGAAGG 
100
AATCGGATCG GTCTAAATCT CGGTCCAAAG GTCCTCCTGT GCAAAGAGCC 
150
CCTTTGAAGC ATAGAGATTA TCATGTAGAC CTAGAATCTC GTCTGGGCAA 
200
GACACAGGTC GTTACACCGG TAGCGCCTCT AAGTCAGCAG GCTGGTTATT 
250
TCTGTCGCGT TTGTGATTGT GTTGTTAAAG ATTCGGCAAA CTACTTGGAT 
300
CACATAAATG GGAAAAAACA TCAAAGGGCA TTGGGGATGT CTATGCGGGT 
350
GGAGAGATCG TCACTTGAAC AAGTCCAAGA GCGGTTCGAG GTTTTAAAGA 
400
AGCGGAAAGC GCCAGGAACT TTCACAGAAC AAGATCTGGA CGAACGCATC 
450
CGAAAACAGC AAGAAGAAGA GGAAGAACTA AAAAGGCAGC GTAGAGAGAA 
500
AAAGAAAGAG AAGAAGAAAG GGAAGGTGGT GGAAGAAGAG CCTGAGATGG 
550
ATCCTGAGGT TGCAGAGATG ATGGGATTTG GGGGCTTTGG ATCTTCAAAA 
600
AAATCATGA
650

>AT3G05760.1 longest ORF length:202
MASSNTTTGV DNTFRKKFDV EEFKERARER EKKESDRSKS RSKGPPVQRA 
50
PLKHRDYHVD LESRLGKTQV VTPVAPLSQQ AGYFCRVCDC VVKDSANYLD 
100
HINGKKHQRA LGMSMRVERS SLEQVQERFE VLKKRKAPGT FTEQDLDERI 
150
RKQQEEEEEL KRQRREKKKE KKKGKVVEEE PEMDPEVAEM MGFGGFGSSK 
200
KS
250