fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G05800 bHLH150, AIF1 AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1 (.1)

>AT3G05800.1 genomic map

>>Show CDS map




Uncut enzymes: ApaI, AscI, NcoI, NheI, NotI, PstI, PvuII, SmaI
Name Recognition sequence Cut positions
BamHI G|GATCC 1064
BglII A|GATCT 1889
EcoRI G|AATTC 170
EcoRV GAT|ATC 2818, 4015
HindIII A|AGCTT 1082, 1923
HpaI GTT|AAC 5931
KpnI GGTAC|C 2245
NdeI CA|TATG 379, 1014, 1525, 3006, 5141, 6017
PacI TTAAT|TAA 6046
SacI GAGCT|C 962, 4058
SalI G|TCGAC 330
SpeI A|CTAGT 2120, 3157
StyI C|C[AT][AT]GG 774, 6306
XbaI T|CTAGA 941
XhoI C|TCGAG 1281


Click here to view TAIR data

>AT3G05800 genomic sequence (4170-4805,) length:6490
gctggctaag aatggactat catcctgttt gaggtaatct cagcatcaaa 
50
acgtgacagt aatagactaa tagctaacta cttacATCCA GTTCTTCAAG 
100
AACCCCCTGA TTTTGATGTT TGTTAGCGCC AGAGATCCCA GCTCCAAAAT 
150
CGGCTAACTT TGGATAATTG AATTCACCTA TATGctattt tagataaatc 
200
tagtaagata ctgatactct tgacatattc tttacTCTCA AGCAGTGCCA 
250
AATATGAAGA GAACATGCCT GGGTATATGT CCGAACATGA TCTCTCCAGA 
300
GTGAAGTTGT CTTTAAGACA TCCCTAAGTG TCGACATCAC TTGAAAGTAT 
350
GTTGCCTTGA TGACATCATC GTCCTTGTCA TATGGCTTAT Cctgcaaata 
400
aataacaaag aacacgtgac aagggttaaa gatttcagca tttcaaaaga 
450
aaacagaaac cgcatctctt gctcccatgc ttgtatcata aaaggaaagg 
500
cttgaaaaca gaaacacacC TTTAGATGGT CAACTTTGAC GGTTAGGGGA 
550
TCTTCACTCT CACTCACctg aacagaaaca aagcacatgg ttttcacact 
600
cagagaacca taacttgata agcagaacac acatgtgtaa gatatacaca 
650
gagcttctga acaattgaat ctttactttt catgaacttt tgatccttta 
700
aaaagatatg ttcctttaac gtacCATCTC TGTTATTCGA AGTTGTCTGT 
750
GACCAATAAG GATGACTTGC TCACCTTGGA TACTTGAAAT ctggaaaatt 
800
ggcaacagct aagtctattc agacagatat aatcatataa agggaaaaca 
850
tacagtgcta acgtgcggca agaaagtagt acCTGGGCAA GTGTGCCAAC 
900
TTCATGAATC CGGTTAATCA ACTCTTTTCC TTTCAACTTC TCTAGAATAT 
950
TCTCAGTTTC AGAGCTCGAA GATGAGTCAG ATGACGCGTC ATCCTTCAAA 
1000
AGGAAAGCCC CTGCATATGG AGCTTGTTGT CTTCTACTCT CTTGTAAAGC 
1050
TGCAAGAACT TTAGGATCct agacaaataa aaagcttata catacaggtg 
1100
agagaacaca agataacaaa atccattctt tcactatgat ttcgaatagc 
1150
taagttgatg taagatacCT TGACATATAT TGGCATGTAA AAGCCAGGAA 
1200
TAAGAGGCTT GTGGGGCAAT GGCAATGCTA TAACctgcaa ttcaacaaca 
1250
taaagctcaa tgaaaacaat cgtagcgaag ctcgaggaaa tggttttgct 
1300
ataaaaggtt ctagcttttg cctgactata aaactaggaa tgatccatcc 
1350
aaatttgcgt atatcaaaag atcagtatac tataaacaca ctcaatttct 
1400
tcaaaatttc gaattttcca accaatgcta ttaaagttta tagttttaac 
1450
tttccaatcg ctagaaccat aaagaaaatt ttgccaattg agctgatttc 
1500
tctatgttct atgaaaaatc aaagcatatg aagtgcacca gccaagttca 
1550
attgtttctg gaaatcttac attccccatg atcataaaat tccccatagt 
1600
cgggaaaaaa aaaagtgtga tcttgaaaaa atttgaacaa acCGTTAGAC 
1650
AATCGTCCAG GTGAGGTTTA GCTGAGACAG TAGTAGTTGA AGACTTTGTG 
1700
TCGGAATCCA AGTCGGAGGA AAAAGAACGA CGACCCAATT CGTAGGAACT 
1750
CCGGTTCCAT CCGGTTAGAA GAGTCAGTTG CTTGAACAAT AGATTCTTAA 
1800
CCGGGGTAGA CCGGAATCGA GTAGCCGGAG TCACGTGATG GGAAGCGTAA 
1850
GCAGTCGGAG TGAGAAACTT CAGCATgacg ggggaggaag atcttgagta 
1900
gcgaatttgg gaaattaggg ttaagcttag cctaataggc aagaaaccgt 
1950
acgaaagtga agaatgttgt agacgaagac tggtggtgtc aaaagccctt 
2000
cataaacccc ttcccaagaa ttaataaaca aaaaaaaaaa aaaaggaaga 
2050
aaacgtattt ttgggaaaag gacatccact gcctccaacg atgtcgtttc 
2100
attgcattta tatcttatta ctagtcttaa accaaaccag gaccggtttg 
2150
aaaaaaaatc ggtcgttagc taaattttgg gccgaagtaa taaactttat 
2200
cttggtcctg ggcttttatt gttttcattt tcaggagccc ttacggtacc 
2250
aattggtact atctttcttc tttggaattt tcgaggaatt tgtttatggt 
2300
taaagtgaaa ctgaaccggt ttgatgatac aacaaattaa gcagatgtat 
2350
tttttttatg tcaaaaaata aaaaagaatt gtttctttct gctaatcagt 
2400
ataactgttg acaaaatgaa atactaaaaa cgtgaaaatt gaaaggaaaa 
2450
aaaaaagaga ggatgttgtg tatataactt aattagtact ctaattattc 
2500
catattgttg ttctttgttt cgcatgcaat gtacggctcc gtttaataat 
2550
tcataagttt gatttctaac atatatcgat gtttttgaca gaatattcag 
2600
aaagatttgt ctataaccaa aaaaaaaaaa aagatagaaa aaatttaagt 
2650
gcacacatac ctaatatttt gttcatgaaa caaatcattg tcatcattat 
2700
taatattatt gtcctgaatt gggataacca aaaaataatc aatgaggata 
2750
acaactaatc atttgatttg ggaataataa ataaacaaac agaaaaggaa 
2800
gaaaaaatta agaagaggat atcaaagcgt gtctgacgcc aggaggcaaa 
2850
tctctctgtc atgactcacg tttattgctt gaaaccccac atttgcattg 
2900
tttttctttg ctaattggat acttttgttt cttaatttct ttgctaatac 
2950
tttgtctttt tttttcgtat gttcttactt cttactagcc taaacaaata 
3000
cgaaacatat gcgtttccca acccttaagt aacttttgac ggatagatgt 
3050
tagattagtt ataatccttg acatggtata aaaatattta aggaaaactt 
3100
ataatgttat ttagtatgta tatatagaac ttgcctttcc acttataaac 
3150
tgattgacta gtgcaatcca aaacccaatt ctatgctttt cgaaaaaaat 
3200
caactaaatc aaattattat tttctaaaaa aaaggaagaa aagtataaag 
3250
aacatgttat atgtttcaca aaacaccaaa tactgaaaat cttttttcga 
3300
aaaaatagag agattttgag ccaaaaaatg tggatgataa atagccacaa 
3350
caaccactaa gcctaaggtg tgaaggtcgt gaaataaaac accatcacat 
3400
gcatcttctc tttttcctat tcttttcctt ttttttttgt tccttcttta 
3450
aaaaaaaaac tcattagctt tttttgtttc tttatgttaa attttgtttg 
3500
atagctattt gttcgatcta ttggttatat tgccaccaat cattgccctc 
3550
cacattatta catcaaactc ctccattcca tcgccaattt tgttcttttc 
3600
acaactaaaa atctacaaac taaatattcc acgtcataac acaaatttac 
3650
gccgctcacc atcataaata gatatgtaaa aagtttcaag tttagtctat 
3700
gagtaaaata tctgttcaaa tatctaattt tgcaacgaag atagatattt 
3750
tcgttcgacg tcgaaagaag aaaagatatt ttttgttcct gaatcatttt 
3800
tctaatctaa aaatgcatta agttcaaact gaattttttt cattcaccag 
3850
ttcaatcata attggccaat gtgattttag acgtacatta ttattaaaga 
3900
aaaataaata aaaaataatg gtattcaatt cgaaaaaccc aagaaaatat 
3950
agaaaataat tgatttaagg gtggcttctc caatctctcc caaatgttta 
4000
tatatagaga attagatatc ccctccaatt actcaaaatt attatcaaaa 
4050
taagaaagag ctcaacattg ttctctgact ctataaataa ctgttcttgg 
4100
aaattttcca agagaacaag aaacaaaaac aaaacgttgt ttaagtgtgg 
4150
ttctatagat ttcttgtgaA TGTCTTCTGA ACAAGGAAAT GGATCGAATC 
4200
CTTCCACGTC ACCGGAGGTA GAAGGGACTA AAACAATCCC CTTTCGCCGG 
4250
AGATTGCAAA GAGGACAAAG AGTTTTCGCT CCAAAGCTGA TGGAGGCTCT 
4300
ACGTCGATCA AGGGTAAGCT CTGAAGAAGC TCCGGTAAGG CATCTTAGTC 
4350
GTAGATGGAG AGCCACAACG GCGCAGAAGG TATATTCCCT AAAGCTCTAC 
4400
GACGCTCTTC AACGATCGCG GCGGAGCGCA ACAGTCCGGG ACACGGCCGA 
4450
CAAAGTCCTT GCGACGACCG CTCGTGGTGC AACTCGGTGG AGCCGAGCCA 
4500
TTTTGGTTAG TCGATTCGGA ACGAGTCTGA GGCGGCGTAG GAATACCAAA 
4550
CCGGCGTCGG CATTAGCTGC GGCGATCAGG GGAAGTGGTG GAAGTGGGAG 
4600
GAGGAGGAAG TTATCGGCGG TGGGAAATCG GGTCCGGGTT TTGGGTGGGT 
4650
TGGTGCCGGG TTGCCGGAGA ACGGCGTTAC CGGAGCTTTT GGACGAGACA 
4700
GCAGATTACA TAGCGGCTTT GGAAATGCAA GTCCGAGCCA TGACAGCTCT 
4750
ATCAAAGATT CTGTCGGAGC TTCAGCCGTC TACTAATCTC GGCTCGGCTT 
4800
TATAGccgag tgtataagcc gatgaatttg tttcaattaa ttcttttacg 
4850
attttatcgt gggaatgtct tattgttttt aatgatttgt ttgccctgga 
4900
aaaaaaaaat tgtcaaaatc atcacgagtt ggacgaaaat actatgtttt 
4950
tctaaaaacc ttataatagg attcgaaata ttttggtgtc gtttcacaag 
5000
tttgaattgt aaatattttc taagaaaatg aaatttctaa aaaaaaattt 
5050
gaatataata agtgtttcaa atatttacta gaagcataat tccagaaatt 
5100
aacttttaaa gtttaaaccc aacgatttgt ctttagtcca catatgtgct 
5150
gatgctcatg acaactttgt atatttaaga taaatccgta agtaaaaaaa 
5200
ttccatcgag aatttaaatg tgtcaatttg gagatattcc tcaagaatct 
5250
aggttccacc agttagatat aaacattaga ggttattcta aaataatatt 
5300
aaaaactcat ttagtttctc tctaaatgtg tatctaattt ataggtccgt 
5350
tgtacgtatc ggatattaaa atcaattgtt cattcaccta ataaaatttt 
5400
aaaagctata tttaagaaaa tgtaatttcg atatttataa gctatatgcc 
5450
aaaaaatttg aattttaata aaagtataaa tatagacgga gaaggcatgt 
5500
gcatgacgac cctacggtcc gactcttttg ctcaaagtgc gtcgcatgtg 
5550
agagacctct ttatctgaat ttagtttctt ctcgaacagt tttttttttt 
5600
tttttttaaa tctttaattt gtaagaaaat taaattcata aagaagatac 
5650
aataagttaa aacgcctttc gtgtgtccta caacttaacc aactttgtga 
5700
aacaaaatga gtgcatatat catactttgt cctcacaaaa atggatcagg 
5750
attatcttta gttatagcta aattcgtaca tgatgaataa tatttagacc 
5800
aataccagcc aaccagttta gtttggttta tggttcgcta attacttaaa 
5850
taaatctgaa agtagataac atttttaaag ttctgacgat atgaatttaa 
5900
gttgaatgtt tgttagcctt tgaagaaatg gttaacgtac gttttgcgaa 
5950
gttaattctc agtcaattat caacaaaaga aaacacatat ttaacctatg 
6000
atatttggag caataacata tgaatgtaaa caacattagg gcattaatta 
6050
attagtagat aattatgaaa atctacgtcc atataacgat cgaggacatg 
6100
gccgacgtga tacgtaggag caaaaattca tataggcaac caattgtggc 
6150
tatcaagtgg tatccatccc tttagttttt atgcaaacca ttaattcatt 
6200
ttaagtgaca aaaggaaaac acggctttat atagctagat tgcaaaatta 
6250
tttgcgatga atatatcatg attgatataa gaaaaaacta atatacgtac 
6300
gatttccaag gacattccac tgttagaaaa aaaactatcg agaatctaag 
6350
tgatgataga ttaacatgtt agaaaaagac aataaaaaga aaaaactatc 
6400
gagaatttga gggattacaa aaacaaatga aagagaggaa agatttgcca 
6450
ttaaagaggt gacacgtttg aagagtaaag cctcaagaaa 
6500