fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G06120 MUTE, bHLH045 MUTE, basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1)

>AT3G06120.1 genomic map

>>Show CDS map




Uncut enzymes: ApaI, AscI, KpnI, NcoI, NheI, NotI, PacI, PstI, SacI, XbaI
Name Recognition sequence Cut positions
BamHI G|GATCC 4323
BglII A|GATCT 279, 1054, 6425, 6554
EcoRI G|AATTC 5362
EcoRV GAT|ATC 2375, 6305
HindIII A|AGCTT 255, 4626, 5413, 5446
HpaI GTT|AAC 2368, 2807
NdeI CA|TATG 3340, 5866, 6280
PvuII CAG|CTG 2053, 2596
SalI G|TCGAC 371
SmaI CCC|GGG 813
SpeI A|CTAGT 3028, 5708
StyI C|C[AT][AT]GG 1275, 2031
XhoI C|TCGAG 318


Click here to view TAIR data

>AT3G06120 genomic sequence (4000-4095,4619-5038,5393-5485,) length:7199
ACGTGGCCGC CGGATAATTG GGTACTGCTT ATGACCCCAC ACACACTGAA 
50
CATTAGAATG AATGTCCCCA CCAATTCCGC CATTACctaa acattagtcc 
100
ggagatacta ttaattagca ttttatttct atacaaacat tttaatattt 
150
tcaaaaaaat tatttgtaat tatggacata gccaattctt tagtttaaca 
200
caaaagtatt gtgagatatt aatcttgttg attctatgat tttgtgtata 
250
tatgaagctt acAATGCGTA GGGGATTGAG ATCTATATCA TAAGGGAGAC 
300
ATCCGAAAAG CCTTTGTCTC GAGGGATGAT CTTCATCTCT CAAAGTAGAT 
350
GGAGTTGAGC CAGCTTCTTG GTCGACTACT CTTGACCGTG CCTCACCATT 
400
CATcttctta attccttcaa gatatagtga tcaagaactg aggaaagtca 
450
caatcaaggt ggcttgatcc gctttatgaa tgatctaatg gaacaaaaaa 
500
agagagatag agagaaaaac gcaaagaaga tggaaattaa agagtaatta 
550
ttttatttca acaaaaagaa gaattagtag agtgctgcta tattcctttg 
600
gttaagcagt ctgaaaggag aagagggtgc tcaacacttt tcttgtgttc 
650
aattttcact tcctacctac caatatttct taatgttaat ttggtgattt 
700
ctaagtcatc tatttatttt aatcatcttc atttcatgtg taaaaaggtt 
750
gactctctta aatcttttca cttaaaaaaa caaacaaatt gtTGCACCAG 
800
CCGGGAATCG AACCCGGGTC TGTACCGTGG CAGGGTTCTA TTCTACCACT 
850
AGACCACTGG TGCttattga ttcatctatc cgaactaaac tattaaatat 
900
taattacgaa tctagggtta tttatctttc tgattaagag ttttcgtctg 
950
tacaagtgga attttgaaaa aagaagcaga gagcgATGGA GAAAGTGGTT 
1000
GATCTCTTCG GAGTCGGAGA AGCTAATTCC CAGAAGCTAC TCGAAGGAGG 
1050
CAAAGATCTC AGCGAGATCC AACAGgtttt cttcgtttct cttctctatc 
1100
tatccgtcta atttcacact tggaatttct caggttttgg agtctttaat 
1150
tccgaaaaat cgtttgttgg atgagtttat tctcagGGAT TGTTCATAGG 
1200
ATCAGTAGCT GAAGCGAATA ACAAGGATTT TCTCAAAAGC TCTAATATCA 
1250
CTCATGTCTT AACCGTTGCT GTGGCCTTGG CTCCTCCTTA TCCTGATGAT 
1300
TTTGTCTACA AAGTCATTGA AGgttgggtt ttttttcttc aatccttagc 
1350
ctgtttttga aatttttcgt ttagagattt tataaacttg ttcttcatcg 
1400
tgtagtggtt gatagatccg agaccgattt gacagTATAT TTCGATGAGT 
1450
GTTATAGCTT CATCGACCAA GCTATTCAAT CTGGTGGTGG TGTTTTGGTT 
1500
CATTGCTTCA TGGGAATGTC TAGGAGgttt tgattctttt gcccttaaat 
1550
ctcatacatt cagttattag atttagtgtt taagaatcat caatgtgaac 
1600
caattgcaaa ttatgtaacc atatcaaaaa agtgtatata aattgccaac 
1650
tgagtaacca taggaaacta cagagactca gattggcaaa agtgtatatg 
1700
aatcttgtag tttgctttga ttcttttata gcttgctgat tctggtatta 
1750
gtaggagtta tggtagtgaa cagattacat tttgttgtgg acaaattaag 
1800
agtttttctt gaacctgtaa tttgcttatt gtgtcgttct gttatatata 
1850
tacttacaca atttgattgg tttgagtttt tctttgaagT GTGACTATAG 
1900
TGGTGGCTTA CCTGATGAAA AAGCATGGAA TGGGATTCTC TAAAGCTATG 
1950
GAACTTGTAA GGAGCCGACG ACATCAGGCA TATCCTAATC CCGGTTTCAT 
2000
TTCGCAGCTC CAGCAATTTG AAAAATCCAT CCAAGGTAAT GCATGAttgc 
2050
ttcagctgat aagaagattc aagatagtgg catgatgaac tctcatgaaa 
2100
ttccggcaag tgtcttcagc cccatgttgg ccaaaaaagt tgattggttt 
2150
cgtgctgtga aggatttttt cttgtgaact attgatggtg agcactttgc 
2200
catgtccatt agccaattga aatgaatgaa aacgcagaat ttacatttcc 
2250
tctgttacta caatgaatat attttctagg aggatcagtg tgaatttaac 
2300
caaaccaatc ccatacccaa accagactga aaattggttg gtttggtttt 
2350
cgacccttgc attgaatgtt aaccgatatc ttgatcgaac gtgagttttt 
2400
tttttttttt ttcttgtttc attgccttgt cgatcaatat tgtatataac 
2450
gtgatagacc atgaacaaat tgaatatcga agtaggagtt agatttcttt 
2500
actcgtaatt aaatggggca tgcaccttgc atgtcttata cgtattgtag 
2550
cctaacattt gcggctacaa acatttgtca ccaacatttt cattccagct 
2600
gcttccacag ttttgggact tcggagataa tgtatatgtg gatatgcata 
2650
tatgaaccat aaaaataaac gtttgtccaa acaaaaccac aaatagaagt 
2700
gttatccaag tgggtttgtt tcatagaaaa aatattgtca ctatagcaat 
2750
ttttttggtt aggttaaacc ttatttaatg aagtttgtaa tatgaattga 
2800
gatattgtta actttgcaaa acagagccga aattttacga atatctcttt 
2850
attaaaaata aataatataa tttaagaata cttctcggga ggaatcttaa 
2900
tgagccgtcc aggtagctga acaactgaac tttatctttg ctccaaaggt 
2950
tatatcaatt tatgttttct tgtagaacct atatttcatg caaaaagtta 
3000
tccattaacc aatggaaatt ggttccgact agtgatcaag gaaaatgatg 
3050
gaatcatcac gaatgagaaa tttgtggtat taaatgacat agtgattaag 
3100
gaaaacaaaa agttgtaatt caactacaaa ctatgtcgta actatttata 
3150
ttttgttact tgtcaatgtt gtcatttatc ttacaaagtc aataggatag 
3200
aagatgtgaa acataattac acaaaaacga tgtcatatag aaacatgcga 
3250
aatcacataa tcatttcatc acttcgaaat ttcgtagatt tccaatcaga 
3300
tactacccaa tatgtttgct aatagtaagt agtaaaaaac atatgttacg 
3350
ccaaaaaaaa cggcttttga tgtacttatt ttccttcatc gatccatgaa 
3400
aactgtaaaa catctcaata caaactaaac ctttccacca gtatatgtcc 
3450
gattcaatgt ttttttactt tgtgtatgta tcagtgtatt atctgttaat 
3500
aaagagtaaa agaaatccat tttttcttgt gaggacacgc ggtaattaag 
3550
aacaaagaag tggcacaagt gtagaaatta aactagaagt aaaagaaggt 
3600
ggtgcaaagg catgcactct aaatgaaaat acgatattga aattcataaa 
3650
agacctcacg cagtgaatgt aaatgtaaat gtatccaact tcacaaacgt 
3700
gacgtatctt tgtgtatgca tacctttttc tttacgttgt tctaatacat 
3750
atcgatagta ataagagaga gaaagagaaa aatcaagaag agacaaaaga 
3800
atgtcacgag acagcgacat agtgcattta tgaaccttga aaagaaattc 
3850
taaaccctaa ttatcacttg ttgttgcggc tgtataaata cgactttgtt 
3900
ttgaagaatg tgtcgaacaa agtgaaaaca taagatcatc ttcttcgttg 
3950
atagatcaat ataggaactc cagaagagaa tcttgatcaa ttaagtatcA 
4000
TGTCTCACAT CGCTGTTGAA AGGAATCGAA GAAGGCAAAT GAACGAGCAT 
4050
CTTAAATCCC TTCGTTCTTT GACTCCTTGT TTCTACATCA AAAGGgtaaa 
4100
tttcatattt atctgttcga tcccttcata gtcaattagc tagtttggat 
4150
gatatagaaa aaagaactca attcacaatc ctaattattt tctcgaagag 
4200
attggtattt ttttaatgat cgttgctttc ttttgttgaa gttatttcgt 
4250
agaggttgat tcaagattta ttccaattta tttatacaga caattgaacc 
4300
ttctcaaatt gcttatttaa taggatccca gataaaattg tgcaggaacc 
4350
aaaaatctct tagatactta taattggatc atgcatgata atctttctaa 
4400
tattggattt cccaacttac tatttttgga agaaaacaaa atgttgtggc 
4450
atacatatat agttaatcct atattctcac tgtcagactt ccttgtttgt 
4500
atatgttatg catagactgt atatttctct ttggtaactt tctttaaaca 
4550
aactactcgg atgcaccaat ctgtttaata atcatgtggt cttgttttct 
4600
atgattgatc ggtattagGG AGATCAAGCT TCGATCATCG GAGGAGTGAT 
4650
AGAGTTCATC AAAGAGTTGC AGCAATTGGT TCAAGTTCTT GAGTCCAAGA 
4700
AACGTCGAAA GACCCTAAAC CGACCATCTT TCCCTTATGA TCACCAGACA 
4750
ATCGAGCCAT CCAGTTTAGG AGCCGCCACT ACCCGAGTAC CGTTTAGTCG 
4800
AATCGAAAAT GTGATGACCA CAAGTACTTT CAAGGAAGTA GGAGCATGCT 
4850
GTAACTCCCC TCATGCTAAC GTAGAAGCAA AGATTTCAGG TTCTAATGTT 
4900
GTATTGAGAG TTGTCTCTAG GCGAATCGTG GGGCAGCTCG TAAAGATCAT 
4950
CTCTGTCTTA GAGAAGCTAT CTTTTCAAGT TCTTCACCTC AATATTAGTA 
5000
GCATGGAGGA GACTGTCTTA TACTTTTTCG TTGTTAAGgt acatatcttc 
5050
atctacatac aaattaaata cattgttagt caatatattg aacaaccgat 
5100
aaaactcatt atatctatca tgaaattaga tggaatttgg tgttatagaa 
5150
ctattacaaa gtaaaatgct cctaatgaat gatcaaacac caattattgc 
5200
taaaccgatg tcttgcatcg atttagttac ttaaccaaat tatgactatt 
5250
taacttgatt tgtacttctt taatttacac caaaagatat atcaatatta 
5300
ttagttaagc tcaatgtata tatatatgga tcagataata tttgtatgag 
5350
tcttttgttt tgaattcgac ggaattaaat ttacatgtgc agATAGGATT 
5400
GGAGTGTCAC TTAAGCTTGG AGGAGCTAAC TCTTGAAGTT CAGAAAAGCT 
5450
TTGTGTCTGA TGAAGTGATC GTCTCTACCA ATTAAaaaca aaattctaca 
5500
tgtactagag cgtgtatcgt tttttgggat taataatcat ataatcgtta 
5550
catgagcctt gatactttgc tagaaataag ctcctctaaa caaaaccttc 
5600
tttttaaaaa aacacactta tgttttactt agtttgttgt tgtatccgaa 
5650
gttgatcaac gttgtaattt cccacaataa atcatgacat tttatatgct 
5700
ctaattaact agtataatat agttctgaat catccgaatg taaatgtgtg 
5750
tttgtgtgta gtcatactta aattgtaaca ctatattatt tggtagcatt 
5800
tttttcgttt ttttctcgac atattatttg gagcctagtg atcaaaattg 
5850
tgtgtatcaa cgctacatat gtagagcttt aagaaatctt taaacatgtt 
5900
ttaagattgc aaggtttata tacattcata aataaatatt accttgactt 
5950
ttttttttgt tttttttttc taagtcaaaa ctatatatta cctagtacct 
6000
acattctgga cgtaaacttt tttggaaata attttgtaat ttttatcttt 
6050
tgtaaaactt tatgataata aatgtagata aaaataaata tacacatatt 
6100
gtatataaat gaccaaagcc cgaaaggctg ggaagggagt gataacaatt 
6150
aaaagaaaat gaaaagataa taaaaggtgg ggatttggtg aagtgaggcc 
6200
tcacctgttt cttggttaat tatccaattt gtcacgtggt gcttccagaa 
6250
ccatgcatgt ctggcgattg tgacatcttc atatgtaaaa tttgtttttt 
6300
taacgatatc gtacatataa aaatacttct tcaagtacag ctccatttct 
6350
gACCGTTCAA TCTATGGCAA AGGCAGACTT TTTCCGATCC TTCACCGTCT 
6400
CGGATTTAGT TTTCTCACCA TTGAAGATCT AATTTTCCTA CCTTTCTCCA 
6450
TGAGACGCTT TCCTTTAGGT CTCGGGGTGC TGATTTTGCT TCACCGCCGT 
6500
TCGTGgtaag gagtattttg gttttgtttc cttttgtgag agtttctagt 
6550
ctcagatctg ttgattctat gtttgtttta cactttgtat ttctggtttt 
6600
gaatatcagg attatgagtc cggaaagtat ttgttcagat atgatgtatt 
6650
tgtagcttgg gttttttccc ctttagtttg atcttgtatt cgggagtttt 
6700
catttgcttg ccgactttaa tctctacaag gattgtttcc ttgtcggcct 
6750
ttgtaatcat gtgactctaa attttatcaa taaaatcctt attctactaa 
6800
gaaaaaaaaa aaacatttac ttgtttgcaa ttcatttctc aaacaagttt 
6850
aaaccaacct tatttattta acataatttt aaagtaaaaa tcctaaattt 
6900
tacaaaaatt tctgcgttaa aaatatggaa ccgttttttc tgtaaaatat 
6950
tttttttaaa aagtacaaaa tgatttttat tgtgaaacga aaagaatatt 
7000
gttacttaac gaaaaaatga ttttttaaat attacttgtg aaaatctctt 
7050
ctttttttct tttctttttt gcgtctgatt tgatttatat acaatacata 
7100
ataattgaca cataaatttt tatatataga tactacatta tatatatgta 
7150
agaaaattag tgcaaaaacg tatgacgtaa atgatcggta tcacgaaat
7200