fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G06160 AP2/B3-like transcriptional factor family protein (.1.2)

>AT3G06160.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRV, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
BglII A|GATCT 386
EcoRI G|AATTC 286
HindIII A|AGCTT 712
NcoI C|CATGG 44, 110
StyI C|C[AT][AT]GG 44, 110, 121
XhoI C|TCGAG 362


Click here to view TAIR data

>AT3G06160.1 length:993
ATGTGGGCAA CGAAGTCGCG TCGGTGTGCC GTTCATACGT CTTCCATGGC 
50
TTCCGGTGAT GTTCTTCCTA GATTCTTCAC TGTCTTCCTC TCCCATTGCA 
100
GCTCCGAATC CATGGTGATA CCAAGGTCTT ACTACAATCT TTTACCACGT 
150
CCGTTGCCCA AGACTGCGAT TCTCATCGGA ACTGGTGGAA GATTTTGGAA 
200
AGTAGCAATG ACGAGCAAGC AAGAGCAAGT GTATTTTGAA CAAGGCTGGG 
250
GAAATTTCGT TGCTGATAAC CAGTTAAAAG AGGGAGAATT CTTAACTTTT 
300
GTGTTTGATG GGCACAAAAG TTATGAAGTA AGTATCTATG GTCGTGGAGA 
350
TTGCAAAGAG ACTCGAGCAG TCATTCAAGT TGAAGAGATC TCTGATGATA 
400
CAGAAGATGA CAACGTTTCT CTTCATAGCC CTAGCAATGT TTCACTTGAT 
450
AGCCTTAGCA ACGATTCTCA TCATAGCACT AGCAACGTTT CTCTTCGAAG 
500
CCTTAGCAAC GATTCTCTTC ATGGTGATGC TGAGATAGAG AGCGACAGTG 
550
AGTATTCTCC CGAGAACCTA CCCTCAGCCT CTATATCTGT TGAATCCGTT 
600
GAGGTGGTGA ATCCAACAAC AAGCAGGCAG AGAAGTTACA AGAGGAAGAC 
650
CATTGAGAAT CCACATCTGT ATTTGGATGA TCCAAACAAT GTCTGTTTTG 
700
AGACGTGTCT TAAGCTTAGA AAGTTTGAGC TGTTAGTTCA TGCACAGTTG 
750
GTGAAAGACT ACGGCTTGAT ATTCAGCGAC AATGTTGACT ATATTGACGG 
800
ATATGGAAAA CTAACCGCGA AAACGACCAA GTGGGCAGAT CAACGGGTTT 
850
GCATAAACAA ATGGCAGAAA ATATGCGAGA GAAACCAGTT CACAGAGAAT 
900
GACTCCATCC TATGTGAAAT TCTCCGCAAC GAGGACAAAG TGGTTTATGC 
950
AATCAAGATT CACATCTTCC GCGATGCAGC AGCAAGCACT TGA
1000

>AT3G06160.1 longest ORF length:330
MWATKSRRCA VHTSSMASGD VLPRFFTVFL SHCSSESMVI PRSYYNLLPR 
50
PLPKTAILIG TGGRFWKVAM TSKQEQVYFE QGWGNFVADN QLKEGEFLTF 
100
VFDGHKSYEV SIYGRGDCKE TRAVIQVEEI SDDTEDDNVS LHSPSNVSLD 
150
SLSNDSHHST SNVSLRSLSN DSLHGDAEIE SDSEYSPENL PSASISVESV 
200
EVVNPTTSRQ RSYKRKTIEN PHLYLDDPNN VCFETCLKLR KFELLVHAQL 
250
VKDYGLIFSD NVDYIDGYGK LTAKTTKWAD QRVCINKWQK ICERNQFTEN 
300
DSILCEILRN EDKVVYAIKI HIFRDAAAST 
350