fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G06250 FRS7 FAR1-related sequence 7 (.1)

>AT3G06250.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRV, HpaI, NcoI, NheI, NotI, PacI, PvuII, SacI, SpeI, XbaI
Name Recognition sequence Cut positions
BglII A|GATCT 184, 1306
EcoRI G|AATTC 1438
HindIII A|AGCTT 2239
KpnI GGTAC|C 1581
NdeI CA|TATG 2246
PstI CTGCA|G 1104, 1774, 1986, 2022
SalI G|TCGAC 799
SmaI CCC|GGG 1363
StyI C|C[AT][AT]GG 345, 554
XhoI C|TCGAG 1711


Click here to view TAIR data

>AT3G06250.1 length:2295
ATGGTTGTCA AAACTTATCC ATTAGGAATG GTTGGGACTA ACAATGGCAT 
50
TGCTGAAAAC GAAGGAGATT CTGGTCTTGA ACCTTATGTT GGATTAGAGT 
100
TTGATACTGC TGAGGAAGCA AGGGACTACT ACAACTCTTA TGCTACGCGG 
150
ACGGGTTTTA AGGTTAGGAC GGGTCAGTTG TATAGATCTA GGACCGATGG 
200
TACAGTTTCA TCGAGGAGGT TTGTTTGCTC AAAGGAAGGT TTTCAGCTTA 
250
ATTCAAGAAC CGGTTGTCCT GCGTTTATCC GAGTTCAGAG ACGAGATACT 
300
GGCAAATGGG TTCTTGACCA GATTCAGAAA GAGCACAACC ATGACCTTGG 
350
AGGTCATATA GAGGAGGCTC AGACTACTCC CCGTCCTTCT GTACAACAGA 
400
GAGCACCGGC TCCCACTAAG CTAGGCATAT CGGTTCCACA TAGACCCAAG 
450
ATGAAAGTTG TTGACGAGGC TGATAAAGGA AGGTCATGCC CTTCTGGTGT 
500
GATCTCTTTT AAGCGCTTCA AAGGAGCTGA AGATAGTGAT GGGCAAACTC 
550
AGCCCAAGGC CACTGAACCG TATGCAGGGT TGGAGTTCAA CTCAGCTAAT 
600
GAAGCGTGCC AGTTTTATCA AGCGTATGCT GAAGTTGTAG GTTTTAGAGT 
650
TCGAATAGGG CAGTTGTTTC GATCAAAAGT TGACGGTTCG ATCACATCCA 
700
GAAGATTTGT TTGTTCGAAA GAGGGGTTTC AACATCCTTC GAGAATGGGT 
750
TGTGGAGCTT ACATGAGGAT CAAAAGGCAA GACTCTGGAG GTTGGATAGT 
800
CGACCGTCTC AATAAGGATC ATAATCATGA CCTTGAACCG GGAAAGAAGA 
850
ATGCCGGTAT GAAAAAGATA ACAGATGATG TGACAGGAGG GTTGGATTCT 
900
GTGGATCTTA TTGAACTAAA CGACTTAAGC AATCACATCA GTAGTACCCG 
950
AGAAAACACC ATAGGTAAGG AATGGTATCC AGTGCTTCTT GACTATTTTC 
1000
AGTCAAAACA GGCAGAAGAC ATGGGATTCT TTTACGCCAT CGAGCTTGAT 
1050
AGTAACGGAA GCTGCATGAG CATTTTCTGG GCAGATAGTC GGTCAAGATT 
1100
CGCCTGCAGT CAATTTGGTG ATGCTGTTGT TTTTGATACT TCATATAGAA 
1150
AAGGAGACTA CTCTGTTCCG TTTGCAACAT TTATCGGTTT TAATCATCAT 
1200
AGGCAACCCG TGCTTCTCGG GGGTGCCTTA GTTGCTGATG AATCTAAAGA 
1250
GGCTTTCTCA TGGTTGTTTC AGACATGGCT TCGTGCAATG TCAGGCCGTC 
1300
GTCCGAGATC TATGGTAGCT GATCAAGACT TGCCTATCCA ACAAGCTGTG 
1350
GCTCAAGTCT TTCCCGGGAC TCATCACCGG TTCTCAGCGT GGCAAATAAG 
1400
GTCCAAAGAA CGAGAAAATC TCAGGTCGTT CCCGAATGAA TTCAAGTACG 
1450
AGTACGAGAA ATGTTTATAC CAGTCTCAGA CAACGGTCGA GTTTGATACC 
1500
ATGTGGAGTT CTCTTGTAAA CAAATACGGC CTTAGGGATA ACATGTGGCT 
1550
TAGAGAAATA TATGAAAAGC GCGAGAAATG GGTACCGGCA TATCTAAGAG 
1600
CCAGTTTCTT TGGTGGAATC CATGTAGACG GCACCTTTGA TCCGTTTTAC 
1650
GGCACTTCCC TTAATTCTCT AACGTCTCTT AGGGAGTTCA TCTCACGGTA 
1700
TGAGCAAGGA CTCGAGCAGC GCCGTGAAGA GGAAAGAAAA GAAGATTTCA 
1750
ATTCTTATAA CTTGCAGCCG TTTCTGCAGA CAAAAGAGCC CGTTGAAGAA 
1800
CAATGCAGAA GGTTGTACAC GCTCACCATC TTCAGAATTT TCCAGAGCGA 
1850
GCTTGCTCAG TCTTATAATT ACCTCGGTTT AAAGACCTAC GAGGAGGGAG 
1900
CCATCAGCAG ATTTCTAGTG AGGAAATGTG GGAACGAGAA CGAGAAGCAC 
1950
GCCGTGACTT TCAGTGCATC GAATCTCAAT GCAAGCTGCA GTTGTCAAAT 
2000
GTTTGAGTAC GAAGGACTTC TCTGCAGACA TATCTTGAAA GTGTTTAACC 
2050
TCTTAGACAT TCGAGAACTC CCATCTCGGT ATATACTTCA TCGCTGGACC 
2100
AAAAACGCAG AGTTTGGGTT TGTACGAGAT GTAGAATCAG GGGTGACTTC 
2150
TCAGGACCTT AAGGCCTTGA TGATCTGGAG CCTAAGGGAA GCAGCTTCAA 
2200
AGTATATAGA GTTTGGGACA TCGTCTCTGG AGAAGTATAA GCTTGCATAT 
2250
GAGATCATGC GAGAGGGTGG GAAGAAACTG TGTTGGCAGA GATGA
2300

>AT3G06250.1 longest ORF length:764
MVVKTYPLGM VGTNNGIAEN EGDSGLEPYV GLEFDTAEEA RDYYNSYATR 
50
TGFKVRTGQL YRSRTDGTVS SRRFVCSKEG FQLNSRTGCP AFIRVQRRDT 
100
GKWVLDQIQK EHNHDLGGHI EEAQTTPRPS VQQRAPAPTK LGISVPHRPK 
150
MKVVDEADKG RSCPSGVISF KRFKGAEDSD GQTQPKATEP YAGLEFNSAN 
200
EACQFYQAYA EVVGFRVRIG QLFRSKVDGS ITSRRFVCSK EGFQHPSRMG 
250
CGAYMRIKRQ DSGGWIVDRL NKDHNHDLEP GKKNAGMKKI TDDVTGGLDS 
300
VDLIELNDLS NHISSTRENT IGKEWYPVLL DYFQSKQAED MGFFYAIELD 
350
SNGSCMSIFW ADSRSRFACS QFGDAVVFDT SYRKGDYSVP FATFIGFNHH 
400
RQPVLLGGAL VADESKEAFS WLFQTWLRAM SGRRPRSMVA DQDLPIQQAV 
450
AQVFPGTHHR FSAWQIRSKE RENLRSFPNE FKYEYEKCLY QSQTTVEFDT 
500
MWSSLVNKYG LRDNMWLREI YEKREKWVPA YLRASFFGGI HVDGTFDPFY 
550
GTSLNSLTSL REFISRYEQG LEQRREEERK EDFNSYNLQP FLQTKEPVEE 
600
QCRRLYTLTI FRIFQSELAQ SYNYLGLKTY EEGAISRFLV RKCGNENEKH 
650
AVTFSASNLN ASCSCQMFEY EGLLCRHILK VFNLLDIREL PSRYILHRWT 
700
KNAEFGFVRD VESGVTSQDL KALMIWSLRE AASKYIEFGT SSLEKYKLAY 
750
EIMREGGKKL CWQR
800