|
|
|
|
|
|
|
|
| Locus | Common name | Short description |
| AT3G06410 | Zinc finger C-x8-C-x5-C-x3-H type family protein (.1) |
>AT3G06410.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BglII, EcoRI, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, SacI, SalI, SpeI, XbaI, XhoI
| Name | Recognition sequence | Cut positions |
| BamHI | G|GATCC | 42 |
| EcoRV | GAT|ATC | 431 |
| PstI | CTGCA|G | 1283 |
| PvuII | CAG|CTG | 1325 |
| SmaI | CCC|GGG | 444 |
| StyI | C|C[AT][AT]GG | 376 |
Click here to view TAIR data
>AT3G06410.1 length:1389
ATGGAGCGGT ACGGTCGCCC CGGTGAAGAA GGGTCGCGAT CGGATCCATC | 50 |
TCTTGAATGG ACCTCTCATG GTGGTGAAAC CGCTGTCGAA GCTCCGATGT | 100 |
GGCGGTTAGG GTTGAGCGGC GGCGGCGGAG GTGGAGGAGG TGGAGAATCG | 150 |
TACCCGGAGA GACCTGACGA GCCTGATTGT ATTTATTACT TGAGAACCGG | 200 |
CGTTTGCGGG TACGGGTCAA GATGTCGGTT TAATCACCCA CGAGATCGTG | 250 |
GAGCGGTTAT TGGAGGTGTG AGAGGAGAAG CTGGAGCTTT ACCGGAGAGG | 300 |
ATGGGACATC CGGTTTGTCA GCATTTTATG CGAACTGGTA CGTGTAAATT | 350 |
CGGTGCTTCT TGCAAGTATC ATCATCCTAG GCAAGGAGGT GGTGGTGGTT | 400 |
CCGTTGCGCC TGTCTCGCTA AGTTATTTGG GATATCCATT ACGCCCGGGA | 450 |
GAGAAAGAGT GCTCTTATTA CTTGAGAACC GGTCAGTGTA AATTTGGTTT | 500 |
GACTTGTAGA TTCAACCATC CCGTGCCACT CGCTGTACAG GGTCCACCTC | 550 |
AGCAGCCGCA ACAGCAGCAG CCACAGCCAC AGCCGCAGCT ACAGACTATT | 600 |
TATCCGACAC TTCAATCTCA ATCTATTCCT TCGTCTCAAC AATATGGGTT | 650 |
AGTTTTGACT AGGCCTTCTT TTTTAACTGG TTCATATCTT CAAAGCCCTT | 700 |
ACGGTCCTCC AATGGTTCTG CCTCCTGGAA TGGTTCCATA CTCTGGTTGG | 750 |
AATCCTTACC AGGCTTCTTT AAGTGCAATG CCTTCGCCTG GAACTCAACC | 800 |
GTCTATTGGA TCAAGCTCTA TTTATGGACT CACGCCGTTA TCTCCTTCAG | 850 |
CGACTGCATA TACAGGAACA TATCAATCTG TGCCTTCTTC AAATTCCACC | 900 |
TCAAAAGAGT TTCCTCAGCG ACCTGATCAA CCCGAGTGTC AATACTTCAT | 950 |
GAGAACTGGT GACTGTAAAT TCGGATCTTC GTGTCGATAC CATCATCCTG | 1000 |
TAGATGCAGT TCCACCTAAG ACTGGCATTG TCCTCAGCTC CATTGGCCTT | 1050 |
CCACTTCGTC CCGGCGTAGC GCAATGCACT CACTTTGCTC AACACGGAAT | 1100 |
CTGCAAGTTT GGACCGGCGT GTAAGTTTGA TCACTCAATG AGTTCTTCGC | 1150 |
TTAGCTACAG TCCGTCTGCA TCATCACTAA CTGATATGCC CGTGGCGCCA | 1200 |
TACCCAATCG GATCATCCTC ACTCAGCGGC TCATCAGCTC CAGTAAGCTC | 1250 |
TAGCAATGAA CCCACCAAAG AGGCTGTGAC TCCTGCAGTT TCTTCTATGG | 1300 |
TCAGTGGCTT GAGCCGTCCT GAGCCAGCTG AGACGAGTGG TGACTCAGCC | 1350 |
AGCGTCAGTG GCAGCATAGA AGCTAAGACT TCAAGTTAA | 1400 |
>AT3G06410.1 longest ORF length:462
MERYGRPGEE GSRSDPSLEW TSHGGETAVE APMWRLGLSG GGGGGGGGES | 50 |
YPERPDEPDC IYYLRTGVCG YGSRCRFNHP RDRGAVIGGV RGEAGALPER | 100 |
MGHPVCQHFM RTGTCKFGAS CKYHHPRQGG GGGSVAPVSL SYLGYPLRPG | 150 |
EKECSYYLRT GQCKFGLTCR FNHPVPLAVQ GPPQQPQQQQ PQPQPQLQTI | 200 |
YPTLQSQSIP SSQQYGLVLT RPSFLTGSYL QSPYGPPMVL PPGMVPYSGW | 250 |
NPYQASLSAM PSPGTQPSIG SSSIYGLTPL SPSATAYTGT YQSVPSSNST | 300 |
SKEFPQRPDQ PECQYFMRTG DCKFGSSCRY HHPVDAVPPK TGIVLSSIGL | 350 |
PLRPGVAQCT HFAQHGICKF GPACKFDHSM SSSLSYSPSA SSLTDMPVAP | 400 |
YPIGSSSLSG SSAPVSSSNE PTKEAVTPAV SSMVSGLSRP EPAETSGDSA | 450 |
SVSGSIEAKT SS | 500 |