Locus |
Common name |
Short description |
AT3G06590 |
bHLH148, AIF2 |
basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1), basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.2) |
>AT3G06590.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
48 |
HpaI
| GTT|AAC |
490 |
SacI
| GAGCT|C |
284 |
XbaI
| T|CTAGA |
558 |
XhoI
| C|TCGAG |
377 |
Click here to view TAIR data
>AT3G06590.1 length:666
ATGGCGTCTC TGATCTCAGA TATTGAACCG CCGACGAGTA CTACTTCAGA | 50 |
TCTCGTTCGG AGAAAGAAGA GATCCTCTGC TTCATCCGCC GCATCGTCTC | 100 |
GTTCAAGCGC ATCTTCCGTC TCCGGTGAGA TTCACGCGCG ATGGCGATCG | 150 |
GAGAAGCAAC AACGGATCTA CTCAGCCAAA CTGTTCCAAG CGCTCCAACA | 200 |
AGTCCGCCTC AACTCTTCCG CCTCAACATC ATCATCTCCA ACGGCTCAGA | 250 |
AACGAGGAAA GGCCGTCCGT GAAGCCGCCG ATCGAGCTCT TGCCGTTTCC | 300 |
GCTCGGGGAA GAACACTCTG GAGCAGAGCG ATCTTAGCTA ATCGGATCAA | 350 |
ACTGAAATTT CGTAAACAGA GACGTCCTCG AGCTACGATG GCGATTCCGG | 400 |
CCATGACTAC GGTGGTTAGT AGCAGCAGCA ACAGATCGAG AAAACGGAGA | 450 |
GTGTCGGTGT TGAGATTGAA TAAGAAGAGT ATACCGGATG TTAACCGGAA | 500 |
AGTACGTGTT CTAGGCCGGT TAGTTCCCGG TTGCGGTAAA CAATCCGTAC | 550 |
CGGTGATTCT AGAAGAAGCA ACTGATTATA TTCAGGCTCT GGAGATGCAA | 600 |
GTGAGAGCCA TGAACTCTTT AGTTCAGCTT CTCTCCTCCT ACGGCTCAGC | 650 |
TCCTCCACCG ATTTGA | 700 |
>AT3G06590.1 longest ORF length:221
MASLISDIEP PTSTTSDLVR RKKRSSASSA ASSRSSASSV SGEIHARWRS | 50 |
EKQQRIYSAK LFQALQQVRL NSSASTSSSP TAQKRGKAVR EAADRALAVS | 100 |
ARGRTLWSRA ILANRIKLKF RKQRRPRATM AIPAMTTVVS SSSNRSRKRR | 150 |
VSVLRLNKKS IPDVNRKVRV LGRLVPGCGK QSVPVILEEA TDYIQALEMQ | 200 |
VRAMNSLVQL LSSYGSAPPP I | 250 |
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