fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G06590 bHLH148, AIF2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1), basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.2)

>AT3G06590.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI
Name Recognition sequence Cut positions
BglII A|GATCT 48
HpaI GTT|AAC 490
SacI GAGCT|C 284
XbaI T|CTAGA 558
XhoI C|TCGAG 377


Click here to view TAIR data

>AT3G06590.1 length:666
ATGGCGTCTC TGATCTCAGA TATTGAACCG CCGACGAGTA CTACTTCAGA 
50
TCTCGTTCGG AGAAAGAAGA GATCCTCTGC TTCATCCGCC GCATCGTCTC 
100
GTTCAAGCGC ATCTTCCGTC TCCGGTGAGA TTCACGCGCG ATGGCGATCG 
150
GAGAAGCAAC AACGGATCTA CTCAGCCAAA CTGTTCCAAG CGCTCCAACA 
200
AGTCCGCCTC AACTCTTCCG CCTCAACATC ATCATCTCCA ACGGCTCAGA 
250
AACGAGGAAA GGCCGTCCGT GAAGCCGCCG ATCGAGCTCT TGCCGTTTCC 
300
GCTCGGGGAA GAACACTCTG GAGCAGAGCG ATCTTAGCTA ATCGGATCAA 
350
ACTGAAATTT CGTAAACAGA GACGTCCTCG AGCTACGATG GCGATTCCGG 
400
CCATGACTAC GGTGGTTAGT AGCAGCAGCA ACAGATCGAG AAAACGGAGA 
450
GTGTCGGTGT TGAGATTGAA TAAGAAGAGT ATACCGGATG TTAACCGGAA 
500
AGTACGTGTT CTAGGCCGGT TAGTTCCCGG TTGCGGTAAA CAATCCGTAC 
550
CGGTGATTCT AGAAGAAGCA ACTGATTATA TTCAGGCTCT GGAGATGCAA 
600
GTGAGAGCCA TGAACTCTTT AGTTCAGCTT CTCTCCTCCT ACGGCTCAGC 
650
TCCTCCACCG ATTTGA
700

>AT3G06590.1 longest ORF length:221
MASLISDIEP PTSTTSDLVR RKKRSSASSA ASSRSSASSV SGEIHARWRS 
50
EKQQRIYSAK LFQALQQVRL NSSASTSSSP TAQKRGKAVR EAADRALAVS 
100
ARGRTLWSRA ILANRIKLKF RKQRRPRATM AIPAMTTVVS SSSNRSRKRR 
150
VSVLRLNKKS IPDVNRKVRV LGRLVPGCGK QSVPVILEEA TDYIQALEMQ 
200
VRAMNSLVQL LSSYGSAPPP I
250