fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G06740 GATA15 GATA transcription factor 15 (.1)

>AT3G06740.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 379
KpnI GGTAC|C 139


Click here to view TAIR data

>AT3G06740.1 length:450
ATGCTAGATC CCACCGAGAA AGTAATCGAT TCAGAATCAA TGGAAAGCAA 
50
ACTCACATCA GTAGATGCGA TCGAAGAACA CAGCAGCAGT AGCAGTAATG 
100
AAGCTATCAG CAACGAGAAG AAGAGTTGTG CCATTTGTGG TACCAGCAAA 
150
ACCCCTCTTT GGCGAGGCGG TCCTGCCGGT CCCAAGTCGC TTTGTAACGC 
200
ATGCGGGATC AGAAACAGAA AGAAAAGAAG AACACTGATC TCAAATAGAT 
250
CAGAAGATAA GAAGAAGAAG AGTCATAACA GAAACCCGAA GTTTGGTGAC 
300
TCGTTGAAGC AGCGATTAAT GGAATTGGGG AGAGAAGTGA TGATGCAGCG 
350
ATCAACGGCT GAGAATCAAC GGCGGAATAA GCTTGGCGAA GAAGAGCAAG 
400
CCGCCGTGTT ACTCATGGCT CTCTCTTATG CTTCTTCCGT TTATGCTTAA 
450

>AT3G06740.1 longest ORF length:149
MLDPTEKVID SESMESKLTS VDAIEEHSSS SSNEAISNEK KSCAICGTSK 
50
TPLWRGGPAG PKSLCNACGI RNRKKRRTLI SNRSEDKKKK SHNRNPKFGD 
100
SLKQRLMELG REVMMQRSTA ENQRRNKLGE EEQAAVLLMA LSYASSVYA
150