fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G07340 bHLH062 basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1)

>AT3G07340.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, HpaI, KpnI, NcoI, NheI, NotI, PacI, PvuII, SalI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 111
BglII A|GATCT 864
EcoRI G|AATTC 639
EcoRV GAT|ATC 292
HindIII A|AGCTT 1191
NdeI CA|TATG 1285
PstI CTGCA|G 650
SacI GAGCT|C 180, 262, 345, 776
SmaI CCC|GGG 414
StyI C|C[AT][AT]GG 1323


Click here to view TAIR data

>AT3G07340.1 length:1371
ATGGAGAACG AGCTGTTTAT GAATGCAGGA GTTTCGCATC CGCCGGTGAT 
50
GACGTCACCG TCTTCTTCGT CGGCGATGCT TAAGTGGGTT TCAATGGAGA 
100
CTCAGCCAGT GGATCCAAGT CTCAGTCGCA ATCTGTTTTG GGAAAAGTCA 
150
ACGGAACAGA GCATTTTTGA TTCGGCTCTG AGCTCACTCG TCTCTTCTCC 
200
TACGCCGTCA AATTCAAACT TTTCGGTTGG CGGAGTAGGT GGAGAAAATG 
250
TCATTATGAG AGAGCTCATC GGGAAACTGG GTAATATCGG CGATATCTAT 
300
GGAATTACGG CGAGCAATGG AAACTCGTGT TACGCAACTC CGATGAGCTC 
350
TCCACCGCCT GGAAGTATGA TGGAGACGAA AACGACGACG CCGATGGCAG 
400
AACTGTCCGG CGACCCGGGA TTCGCTGAGA GAGCGGCGAG GTTCTCGTGT 
450
TTTGGTAGCC GGAGTTTTAA CAGCAGAACA AACTCGCCGT TTCCGATTAA 
500
TAACGAACCA CCCATCACAA CCAATGAGAA AATGCCACGT GTATCAAGCA 
550
GCCCAGTTTT TAAGCCTCTT GCGTCTCATG TTCCCGCCGG CGAATCGTCC 
600
GGTGAACTTT CCCGGAAAAG AAAAACTAAA TCCAAGCAGA ATTCTCCTTC 
650
TGCAGTTTCA TCATCAAAGG AGATTGAAGA GAAGGAAGAT TCTGATCCAA 
700
AGAGATGCAA AAAATCAGAA GAAAATGGAG ACAAAACTAA ATCAATTGAT 
750
CCTTACAAAG ATTACATTCA TGTTAGAGCT CGACGAGGCC AAGCCACCGA 
800
TAGTCACAGT CTCGCCGAAC GAGTTCGAAG AGAGAAAATA AGCGAAAGAA 
850
TGAAGCTGCT TCAAGATCTT GTCCCTGGAT GCAACAAGGT TACTGGAAAA 
900
GCACTGATGT TGGATGAAAT TATAAACTAT GTCCAATCAT TGCAACGACA 
950
AGTTGAGTTC TTGTCGATGA AGTTATCGTC AGTGAACACC AGGCTGGACT 
1000
TTAACATGGA CGCTCTCTTG TCTAAGGATA TATTTCCTTC AAGCAACAAT 
1050
CTAATGCATC ATCAACAAGT ACTTCAATTA GATTCTTCAG CAGAAACGTT 
1100
ATTGGGTGAT CATCACAACA AAAATTTGCA ATTGAACCCT GATATTTCTT 
1150
CTAATAACGT AATAAACCCT TTGGAAACTT CTGAAACTAG AAGCTTCATT 
1200
TCTCACTTAC CAACACTTGC TCATTTCACT GACTCTATTT CTCAGTATTC 
1250
AACATTTTCC GAAGATGATT TACATAGCAT TATTCATATG GGTTTTGCGC 
1300
AAAACCGTCT CCAAGAATTG AACCAAGGTT CATCAAACCA AGTACCATCG 
1350
CACATGAAAG CTGAACTTTG A
1400

>AT3G07340.1 longest ORF length:456
MENELFMNAG VSHPPVMTSP SSSSAMLKWV SMETQPVDPS LSRNLFWEKS 
50
TEQSIFDSAL SSLVSSPTPS NSNFSVGGVG GENVIMRELI GKLGNIGDIY 
100
GITASNGNSC YATPMSSPPP GSMMETKTTT PMAELSGDPG FAERAARFSC 
150
FGSRSFNSRT NSPFPINNEP PITTNEKMPR VSSSPVFKPL ASHVPAGESS 
200
GELSRKRKTK SKQNSPSAVS SSKEIEEKED SDPKRCKKSE ENGDKTKSID 
250
PYKDYIHVRA RRGQATDSHS LAERVRREKI SERMKLLQDL VPGCNKVTGK 
300
ALMLDEIINY VQSLQRQVEF LSMKLSSVNT RLDFNMDALL SKDIFPSSNN 
350
LMHHQQVLQL DSSAETLLGD HHNKNLQLNP DISSNNVINP LETSETRSFI 
400
SHLPTLAHFT DSISQYSTFS EDDLHSIIHM GFAQNRLQEL NQGSSNQVPS 
450
HMKAEL
500