fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G08500 ATMYB83 myb domain protein 83 (.1)

>AT3G08500.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 256
EcoRV GAT|ATC 648, 668
HindIII A|AGCTT 894
StyI C|C[AT][AT]GG 464


Click here to view TAIR data

>AT3G08500.1 length:1032
ATGATGATGA GGAAACCGGA CATTACTACG ATCAGAGACA AAGGCAAGCC 
50
AAATCATGCA TGTGGTGGTA ATAACAACAA ACCGAAGCTA AGAAAAGGAC 
100
TTTGGTCGCC TGATGAAGAT GAGAAGCTGA TAAGATACAT GTTGACTAAT 
150
GGACAAGGAT GTTGGAGTGA CATCGCTAGA AATGCTGGTC TTTTACGTTG 
200
TGGTAAAAGT TGTCGCCTTC GCTGGATCAA TTACTTGAGG CCTGATCTTA 
250
AACGTGGATC CTTCTCTCCT CAGGAGGAGG ATCTCATCTT CCATTTGCAT 
300
TCCATTCTTG GTAACAGGTG GTCTCAAATA GCTACTCGGC TTCCAGGTAG 
350
AACAGACAAC GAGATCAAAA ACTTTTGGAA CTCGACATTG AAGAAGCGGC 
400
TTAAGAACAA CAGCAACAAC AATACTTCAT CAGGATCATC ACCTAACAAT 
450
AGTAATAGTA ATTCCTTGGA CCCAAGAGAT CAACATGTGG ATATGGGAGG 
500
CAACTCAACT TCATTGATGG ATGACTATCA TCATGATGAA AACATGATGA 
550
CAGTGGGGAA CACCATGCGC ATGGACTCTT CCTCCCCATT CAATGTTGGA 
600
CCAATGGTTA ATAGTGTGGG CTTAAACCAA CTTTATGATC CCTTGATGAT 
650
ATCAGTGCCG GATAACGGAT ATCACCAAAT GGGAAACACA GTGAATGTGT 
700
TCAGCGTTAA TGGTTTAGGA GATTATGGAA ACACAATTCT TGATCCAATT 
750
AGCAAGAGAG TATCAGTAGA AGGTGATGAT TGGTTCATTC CCCCCTCGGA 
800
GAATACCAAC GTCATTGCTT GTAGTACAAG CAACAACCTA AACTTACAGG 
850
CCCTTGATCC TTGCTTCAAT AGCAAAAATC TTTGTCATTC AGAAAGCTTC 
900
AAGGTAGGGA ATGTGTTGGG GATAGAGAAT GGTTCTTGGG AAATAGAAAA 
950
CCCTAAAATC GGAGATTGGG ATTTGGATGG TCTCATCGAT AACAACTCTT 
1000
CTTTTCCCTT CCTTGATTTC CAAGTCGATT GA
1050

>AT3G08500.1 longest ORF length:343
MMMRKPDITT IRDKGKPNHA CGGNNNKPKL RKGLWSPDED EKLIRYMLTN 
50
GQGCWSDIAR NAGLLRCGKS CRLRWINYLR PDLKRGSFSP QEEDLIFHLH 
100
SILGNRWSQI ATRLPGRTDN EIKNFWNSTL KKRLKNNSNN NTSSGSSPNN 
150
SNSNSLDPRD QHVDMGGNST SLMDDYHHDE NMMTVGNTMR MDSSSPFNVG 
200
PMVNSVGLNQ LYDPLMISVP DNGYHQMGNT VNVFSVNGLG DYGNTILDPI 
250
SKRVSVEGDD WFIPPSENTN VIACSTSNNL NLQALDPCFN SKNLCHSESF 
300
KVGNVLGIEN GSWEIENPKI GDWDLDGLID NNSSFPFLDF QVD
350