fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G09230 ATMYB1 myb domain protein 1 (.1)

>AT3G09230.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 708
HindIII A|AGCTT 504
NcoI C|CATGG 638
SacI GAGCT|C 202
StyI C|C[AT][AT]GG 638


Click here to view TAIR data

>AT3G09230.1 length:1182
ATGGAGGCAG AGATCGTGAG ACGATCGGAG GTAACGGGAT TAAGAAGGGA 
50
GGTGGAAGAA TCGTCAATTG GTAGAGGAGA TTGCGATGGT GATGGCGGCG 
100
ATGTGGGAGA AGATGCGGCA GGGTTCGTTG GGACGAGCGG GAGAGGAAGA 
150
AGAGATCGAG TTAAAGGGCC GTGGTCGAAG GAGGAGGATG ATGTGTTGAG 
200
TGAGCTCGTT AAGAGGTTGG GAGCGAGGAA TTGGAGTTTT ATCGCTCGGA 
250
GTATTCCTGG TCGTTCAGGC AAGTCTTGTC GTCTTCGTTG GTGTAATCAG 
300
CTCAATCCAA ATCTTATACG CAATTCATTT ACTGAGGTAG AGGATCAGGC 
350
TATCATCGCA GCACATGCCA TCCACGGAAA CAAATGGGCT GTTATCGCGA 
400
AGCTCCTCCC CGGAAGAACA GATAATGCTA TCAAGAACCA CTGGAACTCT 
450
GCTTTAAGAC GTCGATTCAT AGACTTTGAA AAGGCCAAGA ATATAGGAAC 
500
TGGAAGCTTG GTCGTGGATG ATTCTGGATT TGACAGAACG ACAACAGTAG 
550
CCTCATCAGA AGAAACTTTA TCTTCAGGCG GTGGTTGCCA TGTAACTACT 
600
CCAATTGTAT CTCCAGAAGG CAAAGAAGCT ACCACCTCCA TGGAAATGTC 
650
TGAAGAACAA TGCGTAGAGA AAACAAACGG AGAAGGTATT TCTAGGCAAG 
700
ATGATAAGGA TCCTCCAACG CTTTTCCGCC CAGTGCCTCG GCTCAGTTCT 
750
TTTAATGCTT GCAATCACAT GGAAGGATCA CCCTCTCCAC ATATACAAGA 
800
CCAAAATCAG CTCCAATCAT CTAAACAAGA CGCAGCAATG CTAAGATTGC 
850
TTGAAGGAGC TTACAGCGAA CGGTTTGTGC CTCAAACATG TGGAGGTGGT 
900
TGTTGCAGCA ACAATCCCGA TGGCAGTTTT CAGCAAGAAT CATTGTTGGG 
950
TCCAGAGTTT GTGGATTACT TAGACTCACC AACGTTTCCG AGTTCCGAAC 
1000
TAGCTGCTAT AGCAACGGAA ATAGGCAGCC TCGCTTGGCT GAGAAGCGGT 
1050
TTAGAGAGTA GCAGCGTGAG GGTGATGGAA GACGCAGTTG GTCGGTTAAG 
1100
GCCTCAAGGC TCCAGGGGTC ATCGAGATCA TTATCTTGTA TCTGAACAGG 
1150
GGACGAACAT AACCAATGTC CTGTCCACAT AA
1200

>AT3G09230.1 longest ORF length:393
MEAEIVRRSE VTGLRREVEE SSIGRGDCDG DGGDVGEDAA GFVGTSGRGR 
50
RDRVKGPWSK EEDDVLSELV KRLGARNWSF IARSIPGRSG KSCRLRWCNQ 
100
LNPNLIRNSF TEVEDQAIIA AHAIHGNKWA VIAKLLPGRT DNAIKNHWNS 
150
ALRRRFIDFE KAKNIGTGSL VVDDSGFDRT TTVASSEETL SSGGGCHVTT 
200
PIVSPEGKEA TTSMEMSEEQ CVEKTNGEGI SRQDDKDPPT LFRPVPRLSS 
250
FNACNHMEGS PSPHIQDQNQ LQSSKQDAAM LRLLEGAYSE RFVPQTCGGG 
300
CCSNNPDGSF QQESLLGPEF VDYLDSPTFP SSELAAIATE IGSLAWLRSG 
350
LESSSVRVME DAVGRLRPQG SRGHRDHYLV SEQGTNITNV LST
400