Locus |
Common name |
Short description |
AT3G09600 |
LCL5 (LHY-CCA1-LIKE5), REVEILLE 8 (RVE8) |
REVEILLE 8, LHY-CCA1-LIKE5, Homeodomain-like superfamily protein (.1.2) |
>AT3G09600.2 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HindIII, KpnI, NcoI, NheI, NotI, PacI, PvuII, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BamHI
| G|GATCC |
723 |
HpaI
| GTT|AAC |
772 |
NdeI
| CA|TATG |
843 |
PstI
| CTGCA|G |
821 |
SacI
| GAGCT|C |
3 |
Click here to view TAIR data
>AT3G09600.2 length:849
ATGAGCTCGT CGCCGTCAAG AAATCCAACG AACGCCGAAG CACCTCCGCC | 50 |
ACCACCAACA TCGACGGATG CTGTGGCAGA GGGTTCGTCT AAGAAAGTGA | 100 |
GGAAACCATA TACCATCACC AAGTCAAGAG AGAGCTGGAC AGAGGAAGAG | 150 |
CACGATAAGT TTCTTGAAGC ACTTCAACTG TTTGATCGTG ACTGGAAGAA | 200 |
GATTGAAGAT TTTGTTGGTT CAAAGACTGT GATTCAGATA AGGAGTCATG | 250 |
CTCAAAAATA CTTTCTCAAG GTTCAGAAAA ACGGGACATT AGCTCATGTG | 300 |
CCACCTCCTC GACCTAAGCG CAAAGCAGCT CATCCGTATC CTCAAAAGGC | 350 |
ATCAAAGAAC GCTCAAATGC CACTTCAAGT TTCCACGTCT TTTACTACTA | 400 |
CGCGAAATGG CGACATGCCG GGATATGCTT CATGGGATGA TGCCTCAATG | 450 |
CTGCTAAACA GAGTTATTTC ACCACAACAT GAACTTGCTA CTCTTCGTGG | 500 |
AGCAGAAGCT GATATTGGAT CAAAGGGCTT ATTAAATGTT AGTAGCCCTT | 550 |
CTACATCTGG CATGGGAAGC TCAAGCCGAA CAGTATCAGG TTCTGAGATT | 600 |
GTAAGAAAGG CTAAACAGCC TCCAGTGCTT CACGGTGTTC CTGATTTTGC | 650 |
TGAAGTTTAT AATTTCATTG GGAGTGTCTT TGATCCTGAA ACGAGAGGCC | 700 |
ATGTGGAAAA GCTCAAGGAA ATGGATCCTA TAAATTTCGA AACTGTTCTG | 750 |
TTATTGATGA GAAACCTCAC AGTTAACTTA TCAAACCCTG ATTTAGAATC | 800 |
CACTTCGGAT TGTAATGATG CTGCAGAGGA AAGTCCTCTT ATCATATGA | 850 |
>AT3G09600.2 longest ORF length:282
MSSSPSRNPT NAEAPPPPPT STDAVAEGSS KKVRKPYTIT KSRESWTEEE | 50 |
HDKFLEALQL FDRDWKKIED FVGSKTVIQI RSHAQKYFLK VQKNGTLAHV | 100 |
PPPRPKRKAA HPYPQKASKN AQMPLQVSTS FTTTRNGDMP GYASWDDASM | 150 |
LLNRVISPQH ELATLRGAEA DIGSKGLLNV SSPSTSGMGS SSRTVSGSEI | 200 |
VRKAKQPPVL HGVPDFAEVY NFIGSVFDPE TRGHVEKLKE MDPINFETVL | 250 |
LLMRNLTVNL SNPDLESTSD CNDAAEESPL II | 300 |
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