fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G10113 Homeodomain-like superfamily protein (.1)

>AT3G10113.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 241


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>AT3G10113.1 length:1011
ATGGTAATGA TGATTATTAT ATATACCGAA CCCGAAATCA GCTTGTTTCC 
50
ACTTCAGGAT CGAAGTGAGG AACTAAGCAG CAATGTAGAA AATGGAAGTT 
100
GCAATTCCAA TGAAGGAATT AATCCTGAAA CCAGCAGTCA TTGGATTGAA 
150
AACGTTGTCA AGGTTAGGAA ACCGTACACA GTAACTAAGC AGAGAGAGAA 
200
GTGGAGTGAG GAAGAGCATG ATAGGTTTCT TGAAGCTATC AAGCTTTATG 
250
GTCGTGGGTG GCGTCAAATC CAAGAACACA TAGGTACAAA AACCGCTGTA 
300
CAGATACGAA GCCATGCTCA AAAGTTCTTC TCCAAGATGG CTCAGGAAGC 
350
TGACAGTAGA AGTGAAGGAT CGGTTAAAGC GATTGTGATC CCGCCTCCTC 
400
GTCCAAAGAG AAAACCGGCA CATCCTTATC CTCGGAAATC GCCTGTTCCA 
450
TATACTCAGT CTCCTCCACC AAATTTGTCA GCTATGGAGA AAGGAACCAA 
500
GTCTCCAACC TCAGTGTTAT CATCGTTTGG TTCAGAGGAT CAAAATAACT 
550
ACACAACATC CAAGCAACCT TTCAAAGATG ATTCTGACAT TGGTTCAACA 
600
CCCATTTCAA GCATTACTCT TTTCGGGAAG ATTGTCCTTG TCGCGGAAGA 
650
ATCTCACAAA CCATCCTCTT ACAATGATGA TGATCTTAAA CAAATGACGT 
700
GTCAGGAGAA TCACTACTCA GGGATGCTAG TTGACACTAA TTTATCTCTT 
750
GGTGTATGGG AAACGTTTTG TACTGGTTCT AATGCATTTG GCTCGGTTAC 
800
AGAAGCATCT GAGAACTTGG AGAAGAGTGC AGAGCCGATA AGTTCTTCAT 
850
GGAAACGGTT AAGCTCCTTA GAAAAACAAG GATCTTGTAA TCCTGTAAAT 
900
GCAAGTGGGT TCAGGCCATA CAAGAGATGC CTATCAGAAA GAGAAGTAAC 
950
ATCATCATTG ACGCTGGTAG CTTCAGATGA AAAGAAAAGC CAAAGAGCAC 
1000
GTATATGCTA G
1050

>AT3G10113.1 longest ORF length:336
MVMMIIIYTE PEISLFPLQD RSEELSSNVE NGSCNSNEGI NPETSSHWIE 
50
NVVKVRKPYT VTKQREKWSE EEHDRFLEAI KLYGRGWRQI QEHIGTKTAV 
100
QIRSHAQKFF SKMAQEADSR SEGSVKAIVI PPPRPKRKPA HPYPRKSPVP 
150
YTQSPPPNLS AMEKGTKSPT SVLSSFGSED QNNYTTSKQP FKDDSDIGST 
200
PISSITLFGK IVLVAEESHK PSSYNDDDLK QMTCQENHYS GMLVDTNLSL 
250
GVWETFCTGS NAFGSVTEAS ENLEKSAEPI SSSWKRLSSL EKQGSCNPVN 
300
ASGFRPYKRC LSEREVTSSL TLVASDEKKS QRARIC
350