fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G10470 C2H2-type zinc finger family protein (.1)

>AT3G10470.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 457, 1026
EcoRI G|AATTC 805
HindIII A|AGCTT 1074
PvuII CAG|CTG 8
SpeI A|CTAGT 154
StyI C|C[AT][AT]GG 167, 348
XbaI T|CTAGA 477


Click here to view TAIR data

>AT3G10470.1 length:1197
ATGGAAGCAG CTGCGGAGGC TGTATCAGCC GCTAGGGAGC AATCATTGAT 
50
CCTTAAAGGG AAACGGACTA AGCGGCAACG TCCTCAGTCC CCAATCCCTT 
100
TCTCTATCAT TCCTCCTATG TCTTCGCATG AACCGGATGC TGAAGAAGAG 
150
TCTACTAGTC TTGTTTCCAA GGAGAAGAGT CTCAATGATG AAATCAACAA 
200
CAATAACATC AAGAATAATA ACAATACTTT GATCAATGGT GTTACATCTT 
250
CATCTTCTGC CTCTTCATCT TCCAACAACA ATGCCACATT AAAGGCCACG 
300
GCTGACGAAG AAGATCAAGA TATGGCTAAT TGTTTGATCC TCCTCGCCCA 
350
AGGTCACTCT CTTCCCCACC TCCAACCGCA ACCGCACCCC CAACAACAAA 
400
CAAGACAGCT TATGATGAGT TACCAAGATT CCGGTAACAA CAACAACAAT 
450
GCGTATAGAT CTAGCAGCAG GAGGTTTCTA GAGACATCTT CATCTAACGG 
500
GACCACAACG AACGGTGGTG GAGGCAGAGC CGGTTACTAT GTTTACCAGT 
550
GCAAAACATG TGACCGGACT TTTCCGTCTT TCCAAGCTCT TGGTGGGCAT 
600
AGAGCCAGCC ACAAGAAGCC TAAAGCCGCT ATGGGTCTTC ACTCTAACCA 
650
TGACCACAAG AAGTCTAACT ACGATGACGC CGTTTCTCTC CATCTCAACA 
700
ACGTTCTCAC CACAACTCCT AACAACAATA GTAACCATAG ATCGCTTGTG 
750
GTATACGGCA AAGGTAGTAA TAATAAGGTC CATGAATGTG GGATATGTGG 
800
AGCCGAATTC ACATCCGGGC AAGCATTAGG TGGTCACATG AGACGCCATA 
850
GAGGTGCAGT GGTAGCCGCA GCAGCCGCCT CTACCGCCAC CGTATCGGTT 
900
GCGGCCATTC CGGCTACTGC AAACACGGCT TTGTCATTGT CGCCAATGTC 
950
GTTTGATCAG ATGTCGGAGG GTCCAATTCA GGCTCCCGTT AAGAGAGCGA 
1000
GGAGCGCGGT TGTGTCGTTA GATTTAGATC TGAATCTACC TGCCCCGGAA 
1050
GATGAGAATC GGGTCAACGG ATTAAGCTTT GCTTCAAAGC AAGAACACGA 
1100
ACAAGAACAT GAACAAACAC AACAGAAGAA ACAGAGAGAA GAACAAAAGT 
1150
CTCTTGTCTT GTCTTCTGCT CCTACATTGG TGGATTGCCA TTACTAA
1200

>AT3G10470.1 longest ORF length:398
MEAAAEAVSA AREQSLILKG KRTKRQRPQS PIPFSIIPPM SSHEPDAEEE 
50
STSLVSKEKS LNDEINNNNI KNNNNTLING VTSSSSASSS SNNNATLKAT 
100
ADEEDQDMAN CLILLAQGHS LPHLQPQPHP QQQTRQLMMS YQDSGNNNNN 
150
AYRSSSRRFL ETSSSNGTTT NGGGGRAGYY VYQCKTCDRT FPSFQALGGH 
200
RASHKKPKAA MGLHSNHDHK KSNYDDAVSL HLNNVLTTTP NNNSNHRSLV 
250
VYGKGSNNKV HECGICGAEF TSGQALGGHM RRHRGAVVAA AAASTATVSV 
300
AAIPATANTA LSLSPMSFDQ MSEGPIQAPV KRARSAVVSL DLDLNLPAPE 
350
DENRVNGLSF ASKQEHEQEH EQTQQKKQRE EQKSLVLSSA PTLVDCHY
400