fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G10480 ANAC050 NAC domain containing protein 50 (.1.2.3)

>AT3G10480.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HpaI, KpnI, NcoI, NheI, NotI, PacI, PvuII, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 187
HindIII A|AGCTT 1228
NdeI CA|TATG 506
PstI CTGCA|G 496
SacI GAGCT|C 605
SalI G|TCGAC 1009


Click here to view TAIR data

>AT3G10480.1 length:1344
ATGGGTCGCG AATCTCTGGC TGTTGTGTCC TCGCCGCCAT CGGCGACTGC 
50
GCCCAGTACT GCTGTGTCGG CTACCTCGCT TGCTCCTGGC TTTCGATTTC 
100
ATCCGACTGA TGAGGAACTC GTGAGCTATT ACTTGAAGAG GAAGGTTCTG 
150
GGTAAACCTG TACGCTTCGA TGCGATTGGA GAGGTAGATA TCTACAAGCA 
200
TGAGCCCTGG GATTTAGCAG TGTTTTCGAA GTTGAAAACT CGGGACCAAG 
250
AATGGTACTT CTTCAGTGCG TTAGATAAGA AGTACGGTAA TGGTGCTAGG 
300
ATGAATCGAG CAACTAACAA AGGGTACTGG AAAGCAACTG GAAAAGACAG 
350
AGAAATCCGC CGGGATATTC AGTTGCTCGG TATGAAAAAG ACGCTTGTTT 
400
TCCACAGCGG GCGTGCTCCA GACGGCCTTC GGACTAATTG GGTCATGCAC 
450
GAGTATCGCC TTGTGGAATA TGAAACTGAA ACTAACGGAA GCCTGCTGCA 
500
GGATGCATAT GTGTTGTGCA GAGTGTTTCA CAAGAATAAC ATTGGGCCAC 
550
CAAGTGGGAA CAGATATGCG CCATTCATGG AAGAAGAATG GGCTGATGGT 
600
GGAGGAGCTC TGATTCCAGG AATAGACGTT AGGGTCAGGG TAGAGGCTCT 
650
ACCACAAGCC AATGGAAACA ACCAGATGGA CCAGGAAATG CATTCAGCAA 
700
GCAAGGATCT CATTAACATC AACGAGCTAC CGAGAGATGC TACTCCAATG 
750
GACATCGAAC CTAACCAACA GAATCATCAT GAGAGTGCCT TCAAGCCACA 
800
GGAGAGTAAC AACCATAGTG GTTATGAAGA AGATGAGGAC ACACTCAAAC 
850
GCGAGCACGC AGAAGAAGAT GAGCGTCCTC CTTCTCTATG CATTCTCAAC 
900
AAAGAAGCTC CACTACCTCT CCTGCAATAC AAACGTAGAC GCCAAAACGA 
950
GTCCAACAAC AACTCAAGCA GGAACACACA GGACCATTGT TCGTCCACAA 
1000
TAACAACCGT CGACAATACA ACCACCTTAA TCTCATCATC TGCTGCTGCT 
1050
GCTACCAACA CTGCCATCTC TGCATTGCTT GAGTTCTCAC TTATGGGTAT 
1100
CTCCGACAAG AAAGAAAACC AGCAGAAAGA GGAAACTTCT CCTCCTAGTC 
1150
CAATTGCATC TCCTGAAGAG AAGGTTAATG ATCTCCAGAA GGAGGTTCAC 
1200
CAGATGTCTG TTGAAAGAGA AACTTTCAAG CTTGAGATGA TGAGTGCAGA 
1250
GGCTATGATC AGCATTCTCC AGTCAAGAAT CGATGCGCTG CGTCAGGAGA 
1300
ACGAGGAACT TAAGAAGAAG AACGCCAGTG GACAAGCTAG TTAA
1350

>AT3G10480.1 longest ORF length:447
MGRESLAVVS SPPSATAPST AVSATSLAPG FRFHPTDEEL VSYYLKRKVL 
50
GKPVRFDAIG EVDIYKHEPW DLAVFSKLKT RDQEWYFFSA LDKKYGNGAR 
100
MNRATNKGYW KATGKDREIR RDIQLLGMKK TLVFHSGRAP DGLRTNWVMH 
150
EYRLVEYETE TNGSLLQDAY VLCRVFHKNN IGPPSGNRYA PFMEEEWADG 
200
GGALIPGIDV RVRVEALPQA NGNNQMDQEM HSASKDLINI NELPRDATPM 
250
DIEPNQQNHH ESAFKPQESN NHSGYEEDED TLKREHAEED ERPPSLCILN 
300
KEAPLPLLQY KRRRQNESNN NSSRNTQDHC SSTITTVDNT TTLISSSAAA 
350
ATNTAISALL EFSLMGISDK KENQQKEETS PPSPIASPEE KVNDLQKEVH 
400
QMSVERETFK LEMMSAEAMI SILQSRIDAL RQENEELKKK NASGQAS
450