fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G10480 ANAC050 NAC domain containing protein 50 (.1.2.3)

>AT3G10480.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 187
HindIII A|AGCTT 1225
NdeI CA|TATG 503
SacI GAGCT|C 602
SalI G|TCGAC 1006


Click here to view TAIR data

>AT3G10480.2 length:1341
ATGGGTCGCG AATCTCTGGC TGTTGTGTCC TCGCCGCCAT CGGCGACTGC 
50
GCCCAGTACT GCTGTGTCGG CTACCTCGCT TGCTCCTGGC TTTCGATTTC 
100
ATCCGACTGA TGAGGAACTC GTGAGCTATT ACTTGAAGAG GAAGGTTCTG 
150
GGTAAACCTG TACGCTTCGA TGCGATTGGA GAGGTAGATA TCTACAAGCA 
200
TGAGCCCTGG GATTTAGCAG TGTTTTCGAA GTTGAAAACT CGGGACCAAG 
250
AATGGTACTT CTTCAGTGCG TTAGATAAGA AGTACGGTAA TGGTGCTAGG 
300
ATGAATCGAG CAACTAACAA AGGGTACTGG AAAGCAACTG GAAAAGACAG 
350
AGAAATCCGC CGGGATATTC AGTTGCTCGG TATGAAAAAG ACGCTTGTTT 
400
TCCACAGCGG GCGTGCTCCA GACGGCCTTC GGACTAATTG GGTCATGCAC 
450
GAGTATCGCC TTGTGGAATA TGAAACTGAA ACTAACGGAA GCCTGCTGGA 
500
TGCATATGTG TTGTGCAGAG TGTTTCACAA GAATAACATT GGGCCACCAA 
550
GTGGGAACAG ATATGCGCCA TTCATGGAAG AAGAATGGGC TGATGGTGGA 
600
GGAGCTCTGA TTCCAGGAAT AGACGTTAGG GTCAGGGTAG AGGCTCTACC 
650
ACAAGCCAAT GGAAACAACC AGATGGACCA GGAAATGCAT TCAGCAAGCA 
700
AGGATCTCAT TAACATCAAC GAGCTACCGA GAGATGCTAC TCCAATGGAC 
750
ATCGAACCTA ACCAACAGAA TCATCATGAG AGTGCCTTCA AGCCACAGGA 
800
GAGTAACAAC CATAGTGGTT ATGAAGAAGA TGAGGACACA CTCAAACGCG 
850
AGCACGCAGA AGAAGATGAG CGTCCTCCTT CTCTATGCAT TCTCAACAAA 
900
GAAGCTCCAC TACCTCTCCT GCAATACAAA CGTAGACGCC AAAACGAGTC 
950
CAACAACAAC TCAAGCAGGA ACACACAGGA CCATTGTTCG TCCACAATAA 
1000
CAACCGTCGA CAATACAACC ACCTTAATCT CATCATCTGC TGCTGCTGCT 
1050
ACCAACACTG CCATCTCTGC ATTGCTTGAG TTCTCACTTA TGGGTATCTC 
1100
CGACAAGAAA GAAAACCAGC AGAAAGAGGA AACTTCTCCT CCTAGTCCAA 
1150
TTGCATCTCC TGAAGAGAAG GTTAATGATC TCCAGAAGGA GGTTCACCAG 
1200
ATGTCTGTTG AAAGAGAAAC TTTCAAGCTT GAGATGATGA GTGCAGAGGC 
1250
TATGATCAGC ATTCTCCAGT CAAGAATCGA TGCGCTGCGT CAGGAGAACG 
1300
AGGAACTTAA GAAGAAGAAC GCCAGTGGAC AAGCTAGTTA A
1350

>AT3G10480.2 longest ORF length:446
MGRESLAVVS SPPSATAPST AVSATSLAPG FRFHPTDEEL VSYYLKRKVL 
50
GKPVRFDAIG EVDIYKHEPW DLAVFSKLKT RDQEWYFFSA LDKKYGNGAR 
100
MNRATNKGYW KATGKDREIR RDIQLLGMKK TLVFHSGRAP DGLRTNWVMH 
150
EYRLVEYETE TNGSLLDAYV LCRVFHKNNI GPPSGNRYAP FMEEEWADGG 
200
GALIPGIDVR VRVEALPQAN GNNQMDQEMH SASKDLININ ELPRDATPMD 
250
IEPNQQNHHE SAFKPQESNN HSGYEEDEDT LKREHAEEDE RPPSLCILNK 
300
EAPLPLLQYK RRRQNESNNN SSRNTQDHCS STITTVDNTT TLISSSAAAA 
350
TNTAISALLE FSLMGISDKK ENQQKEETSP PSPIASPEEK VNDLQKEVHQ 
400
MSVERETFKL EMMSAEAMIS ILQSRIDALR QENEELKKKN ASGQAS
450