fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G10480 ANAC050 NAC domain containing protein 50 (.1.2.3)

>AT3G10480.3 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HpaI, KpnI, NcoI, NheI, NotI, PacI, PvuII, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 187
HindIII A|AGCTT 1465
NdeI CA|TATG 605
PstI CTGCA|G 595
SacI GAGCT|C 704
SalI G|TCGAC 1246


Click here to view TAIR data

>AT3G10480.3 length:1581
ATGGGTCGCG AATCTCTGGC TGTTGTGTCC TCGCCGCCAT CGGCGACTGC 
50
GCCCAGTACT GCTGTGTCGG CTACCTCGCT TGCTCCTGGC TTTCGATTTC 
100
ATCCGACTGA TGAGGAACTC GTGAGCTATT ACTTGAAGAG GAAGGTTCTG 
150
GGTAAACCTG TACGCTTCGA TGCGATTGGA GAGGTAGATA TCTACAAGCA 
200
TGAGCCCTGG GATTTAGCAG AGAAGATTCT CTGTTCGTAC CTGGCGCTAA 
250
ATTGCTTTAA GAATTTCGTG TTTGCTTGTG CTACAGTTAT GTTTGCTTGT 
300
GCTACAGTTA TGTTTGCTTT GTTTTCGAAG TTGAAAACTC GGGACCAAGA 
350
ATGGTACTTC TTCAGTGCGT TAGATAAGAA GTACGGTAAT GGTGCTAGGA 
400
TGAATCGAGC AACTAACAAA GGGTACTGGA AAGCAACTGG AAAAGACAGA 
450
GAAATCCGCC GGGATATTCA GTTGCTCGGT ATGAAAAAGA CGCTTGTTTT 
500
CCACAGCGGG CGTGCTCCAG ACGGCCTTCG GACTAATTGG GTCATGCACG 
550
AGTATCGCCT TGTGGAATAT GAAACTGAAA CTAACGGAAG CCTGCTGCAG 
600
GATGCATATG TGTTGTGCAG AGTGTTTCAC AAGAATAACA TTGGGCCACC 
650
AAGTGGGAAC AGATATGCGC CATTCATGGA AGAAGAATGG GCTGATGGTG 
700
GAGGAGCTCT GATTCCAGGA ATAGACGTTA GGGTCAGGGT AGAGGCTCTA 
750
CCACAAGCCA ATGGAAACAA CCAGATGGAC CAGTGGGCTG ATTTACTTAA 
800
ACTGCACAAT TCCATTAAGT TTGCTATCAC CTTTTGTAGA ACTCAGCTCA 
850
ACCTTACAGC TTTATCTAAT GAAAGGTGCT CAACAAGAGA AATATTTATT 
900
GTGTTTTGGT TAATCTGCAA AGAAATGCAT TCAGCAAGCA AGGATCTCAT 
950
TAACATCAAC GAGCTACCGA GAGATGCTAC TCCAATGGAC ATCGAACCTA 
1000
ACCAACAGAA TCATCATGAG AGTGCCTTCA AGCCACAGGA GAGTAACAAC 
1050
CATAGTGGTT ATGAAGAAGA TGAGGACACA CTCAAACGCG AGCACGCAGA 
1100
AGAAGATGAG CGTCCTCCTT CTCTATGCAT TCTCAACAAA GAAGCTCCAC 
1150
TACCTCTCCT GCAATACAAA CGTAGACGCC AAAACGAGTC CAACAACAAC 
1200
TCAAGCAGGA ACACACAGGA CCATTGTTCG TCCACAATAA CAACCGTCGA 
1250
CAATACAACC ACCTTAATCT CATCATCTGC TGCTGCTGCT ACCAACACTG 
1300
CCATCTCTGC ATTGCTTGAG TTCTCACTTA TGGGTATCTC CGACAAGAAA 
1350
GAAAACCAGC AGAAAGAGGA AACTTCTCCT CCTAGTCCAA TTGCATCTCC 
1400
TGAAGAGAAG GTTAATGATC TCCAGAAGGA GGTTCACCAG ATGTCTGTTG 
1450
AAAGAGAAAC TTTCAAGCTT GAGATGATGA GTGCAGAGGC TATGATCAGC 
1500
ATTCTCCAGT CAAGAATCGA TGCGCTGCGT CAGGAGAACG AGGAACTTAA 
1550
GAAGAAGAAC GCCAGTGGAC AAGCTAGTTA A
1600

>AT3G10480.3 longest ORF length:526
MGRESLAVVS SPPSATAPST AVSATSLAPG FRFHPTDEEL VSYYLKRKVL 
50
GKPVRFDAIG EVDIYKHEPW DLAEKILCSY LALNCFKNFV FACATVMFAC 
100
ATVMFALFSK LKTRDQEWYF FSALDKKYGN GARMNRATNK GYWKATGKDR 
150
EIRRDIQLLG MKKTLVFHSG RAPDGLRTNW VMHEYRLVEY ETETNGSLLQ 
200
DAYVLCRVFH KNNIGPPSGN RYAPFMEEEW ADGGGALIPG IDVRVRVEAL 
250
PQANGNNQMD QWADLLKLHN SIKFAITFCR TQLNLTALSN ERCSTREIFI 
300
VFWLICKEMH SASKDLININ ELPRDATPMD IEPNQQNHHE SAFKPQESNN 
350
HSGYEEDEDT LKREHAEEDE RPPSLCILNK EAPLPLLQYK RRRQNESNNN 
400
SSRNTQDHCS STITTVDNTT TLISSSAAAA TNTAISALLE FSLMGISDKK 
450
ENQQKEETSP PSPIASPEEK VNDLQKEVHQ MSVERETFKL EMMSAEAMIS 
500
ILQSRIDALR QENEELKKKN ASGQAS
550