fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G10500 ANAC053 NAC domain containing protein 53 (.1)

>AT3G10500.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, EcoRI, HindIII, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 984
BglII A|GATCT 89, 576
EcoRV GAT|ATC 1449
NdeI CA|TATG 607
SacI GAGCT|C 359, 1153
StyI C|C[AT][AT]GG 151, 1524


Click here to view TAIR data

>AT3G10500.1 length:1650
ATGGGTCGTG GCTCAGTAAC ATCGCTCGCT CCTGGGTTTC GTTTTCATCC 
50
CACAGACGAA GAACTCGTTC GTTACTATCT GAAACGAAAG ATCTGCAATA 
100
AACCTTTTAA GTTCGATGCT ATCTCTGTTA CCGATGTATA CAAATCTGAG 
150
CCTTGGGATC TCCCAGACAA GTCGAGGCTG AAAAGTAGAG ACTTGGAGTG 
200
GTACTTCTTC AGTATGCTTG ATAAGAAGTA TAGAAATGGA TCAAAGACGA 
250
ATCGTGCGAC TGAGATGGGA TATTGGAAGA CTACAGGGAA AGATCGAGAG 
300
ATTCTTAATG GTTCAAAAGT CGTTGGGATG AAGAAGACTC TTGTTTATCA 
350
CAAAGGTCGA GCTCCTCGTG GCGAAAGAAC CAATTGGGTT ATGCATGAGT 
400
ATCGGTTGGT TGATCAAGAC CTTGATAAAA CTGGTGTTCA CCAAGATGCG 
450
TTTGTGCTTT GTAGGATTTT TCAGAAGAGT GGCTCCGGAC CTAAAAATGG 
500
AGAGCAGTAC GGTGCTCCGT TTGTTGAGGA GGAGTGGGAG GAGGAGGATG 
550
ATATGACATT TGTACCTGAC CAAGAAGATC TTGGAAGTGA AGATCATGTT 
600
TATGTCCATA TGGATGACAT TGATCAGAAG TCTGAAAACT TTGTGGTCTA 
650
TGATGCCATT CCTATTCCGT TAAACTTTAT TCACGGGGAG TCGAGCAATA 
700
ATGTTGAAAC AAACTACTCA GACTCCATAA ACTATATACA ACAAACAGGA 
750
AACTATATGG ACTCTGGTGG CTACTTTGAG CAACCAGCAG AATCTTATGA 
800
GAAAGATCAG AAGCCTATCA TCCGTGACCG TGATGGTAGC CTTCAAAATG 
850
AAGGAATTGG ATGTGGGGTC CAGGACAAGC ACTCGGAAAC TTTGCAATCT 
900
TCTGACAACA TCTTTGGGAC TGATACATCA TGCTACAATG ATTTTCCAGT 
950
TGAGAGCAAC TATTTGATTG GTGAGGCGTT TCTGGATCCG AACAGTAATC 
1000
TTCTGGAGAA TGATGGTCTG TACCTGGAAA CAAATGATCT CAGTAGTACT 
1050
CAGCAAGATG GTTTCGACTT TGAAGATTAT CTTACCTTCT TTGATGAAAC 
1100
TTTTGATCCT TCGCAACTGA TGGGAAATGA AGATGTTTTT TTCGATCAAG 
1150
AAGAGCTCTT TCAAGAGGTT GAGACTAAGG AACTAGAGAA AGAGGAGACT 
1200
TCAAGAAGCA AACATGTGGT GGAAGAAAAG GAAAAGGATG AAGCATCTTG 
1250
TTCAAAACAA GTTGATGCAG ATGCAACAGA GTTTGAGCCA GATTACAAGT 
1300
ACCCGTTACT AAAGAAGGCA AGCCACATGT TGGGTGCTAT TCCTGCTCCG 
1350
CTTGCAAATG CTTCTGAGTT CCCTACAAAG GATGCAGCTA TCCGGTTACA 
1400
CGCAGCACAA TCATCAGGTT CAGTTCATGT AACCGCAGGT ATGATCACGA 
1450
TATCAGACAG CAACATGGGC TGGTCATACG GCAAAAACGA GAACCTTGAC 
1500
TTGATCCTTT CTTTGGGGTT GGTCCAAGGG AATACCGCCC CCGAAAAATC 
1550
AGGGAATAGT TCAGCATGGG CAATGTTAAT ATTCATGTGT TTCTGGGTTC 
1600
TTCTACTCTC AGTTAGTTTC AAAGTGAGCA TTTTGGTCTC TTCCAGGTGA 
1650

>AT3G10500.1 longest ORF length:549
MGRGSVTSLA PGFRFHPTDE ELVRYYLKRK ICNKPFKFDA ISVTDVYKSE 
50
PWDLPDKSRL KSRDLEWYFF SMLDKKYRNG SKTNRATEMG YWKTTGKDRE 
100
ILNGSKVVGM KKTLVYHKGR APRGERTNWV MHEYRLVDQD LDKTGVHQDA 
150
FVLCRIFQKS GSGPKNGEQY GAPFVEEEWE EEDDMTFVPD QEDLGSEDHV 
200
YVHMDDIDQK SENFVVYDAI PIPLNFIHGE SSNNVETNYS DSINYIQQTG 
250
NYMDSGGYFE QPAESYEKDQ KPIIRDRDGS LQNEGIGCGV QDKHSETLQS 
300
SDNIFGTDTS CYNDFPVESN YLIGEAFLDP NSNLLENDGL YLETNDLSST 
350
QQDGFDFEDY LTFFDETFDP SQLMGNEDVF FDQEELFQEV ETKELEKEET 
400
SRSKHVVEEK EKDEASCSKQ VDADATEFEP DYKYPLLKKA SHMLGAIPAP 
450
LANASEFPTK DAAIRLHAAQ SSGSVHVTAG MITISDSNMG WSYGKNENLD 
500
LILSLGLVQG NTAPEKSGNS SAWAMLIFMC FWVLLLSVSF KVSILVSSR
550