Locus |
Common name |
Short description |
AT3G10580 |
|
Homeodomain-like superfamily protein (.1.2) |
>AT3G10580.2 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
EcoRI
| G|AATTC |
516 |
HindIII
| A|AGCTT |
744 |
PstI
| CTGCA|G |
115 |
SmaI
| CCC|GGG |
683 |
StyI
| C|C[AT][AT]GG |
155, 286 |
Click here to view TAIR data
>AT3G10580.2 length:771
ATGGATGCAG CAATTCCGAT TTGGAAGAGG GACGATGATA AGCGTTTTGA | 50 |
GTTAGCTCTG GTTCGATTCC CTGCTGAGGG TTCGCCGGAT TTTTTAGAGA | 100 |
ATATCGCTCA GTTTCTGCAG AAACCGTTAA AGGAGGTGTA CTCCTACTAC | 150 |
CAAGCCTTGG TCGATGATGT TACGCTGATC GAATCGGGTA AGTATCCTTT | 200 |
GCCCAAGTAC CCGGAAGATG ATTACGTGTC ACTGCCGGAA GCGACTAAGT | 250 |
CTAAAACCCA GGGCACGGGG AAAAAGAAGG GAATACCTTG GTCACCAGAA | 300 |
GAACACAGAT TGTTTTTGGA TGGACTAAAC AAGTATGGGA AAGGAGATTG | 350 |
GAAGAGCATA TCGAGGGAAT GTGTGACGTC AAGGAGCCCG ATGCAAGTGG | 400 |
CAAGCCATGC TCAGAAGTAT TTCTTAAGGC AAAAAAATAA GAAGGGGAAA | 450 |
CGCTTCAGTA TCCATGATAT GACTCTGGGA GATGCCGAAA ATGTAACCGT | 500 |
CCCTGTATCC AACTTGAATT CTATGGGCCA GCAGCCACAT TTTGATGACC | 550 |
AAAGTCCTCC GGATCATTAT CAAGACTACT TCTCCCAGAG CAATGTAACC | 600 |
ATCCCTGGAT GCAACATGCA CTTTATGGGC CAGCAACCAC GTTTTGGTGA | 650 |
CCAAATTCCT CCGGGTGAAT ATCACCCCTA CTCCCGGGAC AATGAAAACT | 700 |
TCGGGTTTTT CGATGATGAT GGTGAAGATG ATGGGAGTTT AGCAAGCTTT | 750 |
CAACAACTAT ACAAGGCTTA A | 800 |
>AT3G10580.2 longest ORF length:256
MDAAIPIWKR DDDKRFELAL VRFPAEGSPD FLENIAQFLQ KPLKEVYSYY | 50 |
QALVDDVTLI ESGKYPLPKY PEDDYVSLPE ATKSKTQGTG KKKGIPWSPE | 100 |
EHRLFLDGLN KYGKGDWKSI SRECVTSRSP MQVASHAQKY FLRQKNKKGK | 150 |
RFSIHDMTLG DAENVTVPVS NLNSMGQQPH FDDQSPPDHY QDYFSQSNVT | 200 |
IPGCNMHFMG QQPRFGDQIP PGEYHPYSRD NENFGFFDDD GEDDGSLASF | 250 |
QQLYKA | 300 |
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