fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G10585 Homeodomain-like superfamily protein (.1)

>AT3G10585.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 366
StyI C|C[AT][AT]GG 286


Click here to view TAIR data

>AT3G10585.1 length:519
ATGGCTTTGA TTCCGCCGTG GACGAGAGAC AATGACAAGC GTTTTGAGTT 
50
AGCCCTGGTG ATATTCCCTG AGGGCTCGCC GTATTTTTTG GAGTACATTG 
100
CCGAGTTTCT ACAGAAACCT TTGGAGGAGG TGAAGTACTA CTACGACGCA 
150
ATATTGGTCT ATGATGTTGT GCTGATCGAA TCGGGTAAGT ATGCATTACC 
200
CAAGTACCCG GAAGCCTATT ACGTGTCACT GACGGAAGCG ACTGAGTCCA 
250
AACACGGGGA GACGAATCAG ATACCGAGGA TAATTCCTTG GACAGAAGAG 
300
GAACACAGAG TCTTAAATCT TGCTGGAGTT GATGCATTAA GGTATGGGAA 
350
AGGAGCTTGG AGTATGATAT CAAGGGAATT TGTGACCTCA ACACAAGTAG 
400
CAAGTCATGC ACAAAAGTAT GACAAAAGGC AAAAATTGGA CAGTAAGAAG 
450
AGGAAACGCT GGAGTGTCCT TGACATAACT TTGGAGTCTA CTAAGGGCAA 
500
GTCAGATTTT GTTAAGTAG
550

>AT3G10585.1 longest ORF length:172
MALIPPWTRD NDKRFELALV IFPEGSPYFL EYIAEFLQKP LEEVKYYYDA 
50
ILVYDVVLIE SGKYALPKYP EAYYVSLTEA TESKHGETNQ IPRIIPWTEE 
100
EHRVLNLAGV DALRYGKGAW SMISREFVTS TQVASHAQKY DKRQKLDSKK 
150
RKRWSVLDIT LESTKGKSDF VK
200