fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G10590 Duplicated homeodomain-like superfamily protein (.1)

>AT3G10590.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
PstI CTGCA|G 199
StyI C|C[AT][AT]GG 334, 591


Click here to view TAIR data

>AT3G10590.1 length:621
ATGGCTTCGA GTCCACGCTG GACGGAGGAC GACAACAGGC GTTTTAAGTC 
50
AGCTCTGTCG CAATTCCCTC CGGATAACAA GCGTTTGGTG AATGTCGCCC 
100
AGCATCTGCC GAAACCTTTG GAGGAGGTGA AGTACTACTA CGAAAAGTTG 
150
GTCAACGATG TTTATCTGCC GAAACCTTTA GAGAATGTCA CCCAGCATCT 
200
GCAGAAACCT ATGGAAATGG AGGAGATGAA GTACATGTAC GAAAAGATGG 
250
CCAACGATGT TAATCAGATG CCCGAGTACG TACCACTGGC GGAATCGAGT 
300
CAGTCCAAAC GCAGGAAGAA GGATACGCCA AATCCTTGGA CAGAAGAGGA 
350
ACACAGATTG TTTCTGCAAG GATTGAAAAA GTATGGGGAA GGAGCTTCGA 
400
CGTTGACATC AACGAATTTT GTGAAGACAA AGACTCCACG GCAAGTGTCA 
450
AGCCATGCAC AGTATTACAA AAGGCAAAAA TCGGACAATA AGAAGGAGAA 
500
ACGCCGGAGT ATTTTTGACA TAACTTTGGA GTCTACCGAG GGCAATCCAG 
550
ATTCTGGAAA TCAGAACCCT CCGGATGATG ATGATCCGTC CCAAGGTCAA 
600
GGCACTTGTC TTGGAGTTTA G
650

>AT3G10590.1 longest ORF length:206
MASSPRWTED DNRRFKSALS QFPPDNKRLV NVAQHLPKPL EEVKYYYEKL 
50
VNDVYLPKPL ENVTQHLQKP MEMEEMKYMY EKMANDVNQM PEYVPLAESS 
100
QSKRRKKDTP NPWTEEEHRL FLQGLKKYGE GASTLTSTNF VKTKTPRQVS 
150
SHAQYYKRQK SDNKKEKRRS IFDITLESTE GNPDSGNQNP PDDDDPSQGQ 
200
GTCLGV
250