fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G10595 Duplicated homeodomain-like superfamily protein (.1)

>AT3G10595.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 172


Click here to view TAIR data

>AT3G10595.1 length:552
ATGGCTGAAA ATTCATGGAC GACAGAGGAG AACGAGATGT TCAAGGATGC 
50
ACTGGTGATG TTCACTGCCT TTTTGCTTAC TCGGTTTGAG AGTGTCGCCG 
100
AGTATGTGGA TAGATCGGTG GATGATGTTA AGGAGCATTA CAAGGAATTG 
150
GTCAATGATC TTTTAGAGAT GGGATCCAGT CGAGTAGCTT TTCCTAATGA 
200
ATTGACTAAG GATATGGCTC AAAGTTCGTA CCAGGCCGAG AGAACTATAT 
250
GGACCAAAGA AACACATGAA TGGTTTCTGA TTGGGTTAGA CCGATTTGGG 
300
AAAGATTGGC GTAAAATAGC CGTCTTATTG GATTGCAAGA GCCCGATCCA 
350
AGTCGAGATA TATGCAGAAA ACTTTTACCA GTGGCAAAGC TCAAAGAAAA 
400
ATGTGATTAA CGACTTAAAT GTGGCAAGCA CCGATGTGAA TGTGATGAAA 
450
CGGCAGGGAG CAAATAACAC CAATGTGGAC TCAACAGGCC AACAAGAGAG 
500
TCTCGTCGCT CTGGAAATCG GTCACCATGC TAAGGCCCCC AACTCAAAGT 
550
GA
600

>AT3G10595.1 longest ORF length:183
MAENSWTTEE NEMFKDALVM FTAFLLTRFE SVAEYVDRSV DDVKEHYKEL 
50
VNDLLEMGSS RVAFPNELTK DMAQSSYQAE RTIWTKETHE WFLIGLDRFG 
100
KDWRKIAVLL DCKSPIQVEI YAENFYQWQS SKKNVINDLN VASTDVNVMK 
150
RQGANNTNVD STGQQESLVA LEIGHHAKAP NSK
200