fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G10760 Homeodomain-like superfamily protein (.1)

>AT3G10760.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, PacI, SalI, SmaI, StyI, XbaI
Name Recognition sequence Cut positions
BglII A|GATCT 261
EcoRI G|AATTC 241
NheI G|CTAGC 547
NotI GC|GGCCGC 669
PstI CTGCA|G 248, 677
PvuII CAG|CTG 337, 728
SacI GAGCT|C 61
SpeI A|CTAGT 802
XhoI C|TCGAG 995


Click here to view TAIR data

>AT3G10760.1 length:1008
ATGAGAGAAG ACGATTCAGA CTGGTTCGCA AGATGGGAAG AAGAACTTCC 
50
ATCACCAGAA GAGCTCATGC CAATATCACA ATCTCTAATC TCACCCGATC 
100
TAGCTCTAGC CTTCGATATA CGAACCCCAA ATCACGGAAA CGGAAACTCA 
150
AACCAACCTC ATCATCATCA TCATCACCAA ACCACACCTC CTACACCGTC 
200
TCAGCTTCAG CTTCCATCTT CTCAAGCCAA TTCCTCAGCC GAATTCGCTG 
250
CAGATTCAGC AGATCTAGGC TCCGGAGGAG CTGCCGGAGA CGAACCAGCT 
300
CGGACTTTAA AACGACCTCG TCTTGTCTGG ACACCGCAGC TGCATAAACG 
350
TTTCGTTGAT GCTGTTGCGC ATTTAGGGAT TAAGAACGCA GTTCCTAAAA 
400
CGATTATGCA GCTTATGAGT GTTGATGGTT TAACTAGAGA AAACGTTGCG 
450
AGTCATTTGC AAAAGTATAG ACTTTATCTT AAGAGAATGC AAGGTTTGTC 
500
TTCTGGTGGT GGTGCTGGTT CAGATCCAGC TACTGATCGT CTTTTCGCTA 
550
GCTCTCCTGT TCCTGCTCAC TTTCTTCATC CTAATCGTGT TCCCAGTTCT 
600
GATCATTTCA TGCCGTCTTT TGTTCCTATT GCTACTCTTC AACAACAACA 
650
ACAAATGGCT GCTGCTGCGG CCGCTGCTGC AGCAGCTAAT CCTCATTTAC 
700
AACCGCCTCA GTTCCACCGT CAAATCGCAG CTGCGCATTT TGGTTCACCG 
750
ACTAATGGTG GATTCAGTTC ACCGACGAGT AATGGACAGT TTGGATCACC 
800
GACTAGTAAT GGATTTGGAT CACCGACGAC TAATGGGAAG TTTGATCCTT 
850
CGTTCTTGGC GGTGAGGCAA ACGCAGCAGC AACCAATTCA GAGAATGTCT 
900
ACACCATCAT TGCATAGTCC AGTTAGTAAT TACGTTGAGG ATTTGGAATC 
950
TGCAAACGCT AATGGAGGGA GAACTGTCTT AACTTTATTC CCAACTCGAG 
1000
ACGATTAA
1050

>AT3G10760.1 longest ORF length:335
MREDDSDWFA RWEEELPSPE ELMPISQSLI SPDLALAFDI RTPNHGNGNS 
50
NQPHHHHHHQ TTPPTPSQLQ LPSSQANSSA EFAADSADLG SGGAAGDEPA 
100
RTLKRPRLVW TPQLHKRFVD AVAHLGIKNA VPKTIMQLMS VDGLTRENVA 
150
SHLQKYRLYL KRMQGLSSGG GAGSDPATDR LFASSPVPAH FLHPNRVPSS 
200
DHFMPSFVPI ATLQQQQQMA AAAAAAAAAN PHLQPPQFHR QIAAAHFGSP 
250
TNGGFSSPTS NGQFGSPTSN GFGSPTTNGK FDPSFLAVRQ TQQQPIQRMS 
300
TPSLHSPVSN YVEDLESANA NGGRTVLTLF PTRDD
350