fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G10800 BZIP28 Basic-leucine zipper (bZIP) transcription factor family protein (.1)

>AT3G10800.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRV, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
BglII A|GATCT 343
EcoRI G|AATTC 986
HindIII A|AGCTT 1059
NcoI C|CATGG 1847
SacI GAGCT|C 1759
StyI C|C[AT][AT]GG 1847
XhoI C|TCGAG 900


Click here to view TAIR data

>AT3G10800.1 length:2028
ATGACGGAAT CAACATCCGT GGTTGCTCCT CCGCCGGAGA TACCTAATCT 
50
GAACCCTAGC ATGTTTTCTG AGTCCGATTT GTTTTCTATT CCGCCGCTAG 
100
ATCCTCTTTT CCTATCTGAT TCTGATCCGA TTTCAATGGA TGCGCCAATC 
150
TCCGATCTCG ACTTCTTACT CGACGATGAG AACGGAGATT TCGCTGATTT 
200
TGATTTCTCG TTTGATAATT CTGATGATTT CTTCGATTTC GATTTATCGG 
250
AGCCCGCGGT GGTGATCCCT GAGGAGATCG GTAACAATCG TTCGAATTTG 
300
GACTCATCGG AAAACAGAAG CGGCGATGGA GGTTTAGAAG GAAGATCTGA 
350
GTCTGTTCAT TCACAGGTTT CATCTCAAGG CTCCAAGACT TTTGTGTCCG 
400
ACACCGTTGA CGCATCATCC TCCCCTGAAT CAAGCAATCA CCAGAAATCT 
450
TCTGTTAGCA AGAGGAAGAA GGAAAATGGA GACTCCAGTG GCGAATTAAG 
500
GAGCTGCAAG TACCAAAAGT CCGATGATAA ATCAGTCGCT ACGAACAACG 
550
AAGGTGATGA TGACGACGAC AAGAGGAAGT TGATAAGGCA GATTAGGAAC 
600
CGTGAAAGTG CTCAGCTTTC GAGGTTGAGG AAGAAGCAAC AAACTGAGGA 
650
GCTTGAAAGA AAAGTGAAGA GTATGAATGC TACCATTGCT GAATTGAATG 
700
GTAAGATTGC TTATGTTATG GCTGAGAATG TCGCTTTAAG GCAACAAATG 
750
GCTGTTGCTT CTGGTGCTCC TCCTATGAAT CCTTATATGG CTGCCCCGCC 
800
TTTACCGTAT CAATGGATGC CGTATCCGCC GTATCCTGTT AGGGGATATG 
850
GATCACAGAC ACCTTTGGTT CCCATTCCTA AGTTAAATCC TAAGCCTGTC 
900
TCGAGTTGTA GACCGAAGAA GGCAGAGAGT AAGAAGAATG AGGGTAAAAG 
950
TAAGCTCAAG AAGGTTGCTA GTATTAGTTT TATTGGAATT CTCTTCTTTG 
1000
TCTTCTTGTT TGGTACATTG GTTCCTTTTA TGAATGTAAA TTTTGGAGGA 
1050
GAACGTGGAA GCTTTGGCGG TTTGTCTAAA TATGATGGCC ACCGGTATTA 
1100
CGATGAACAT AAGGGGAGGG TTTTAATGGT CGGCGATGGT TCTGATGTTA 
1150
GAAGAAATAG TGGAATTTCT GAAGGAAATA TCCATTCTAG TAGGATTAGT 
1200
CATGGTGAGA GAGATAGTTG TGGAGGAGTA GATTATAATG CTCATCCGAA 
1250
AGTAGAAGGA CGACCAAGTT CGTTGAGCAA TGCCAGTGAT CCTCTCTTTG 
1300
CTTCTCTCTA TGTCCCAAGA AACGATGGGC TTGTGAAGAT CGATGGGAAC 
1350
TTGATAATTC ACTCTGTTTT GGCGAGCGAG AAAGCAAGGG GTTTAGGAAA 
1400
GAAGAATATC ACTGAAACAG TAAAAACTAA AGAACCGGAT TTGACCATTC 
1450
CTGGTGCACT GTCTTCTGCA TTAGCTGTTC CGGGGGTAAG AGGAAATGCA 
1500
GCAATGCTTC CGCATTCAAC AGCTCTCTCT TCTGAAGGGA AAAGACTTCA 
1550
CCAATGGTTT CATGAAGGTG GCTCAGGGCC ACTAATGGAT TACAGCATGT 
1600
GCACCGAGGT TTTCCAGTTT GATATTGCTC CTGGTGCTAT AGTCCCGTCA 
1650
TCAGTCTCCA GCATTTCTGC GGAGCATCTC CAAAATGTCA CTACCCACGG 
1700
CAAGAGAATG AAGAACAGGA GAATCCTTGA GGGACTTCCT GTTTCACTTG 
1750
TGGCGTCAGA GCTCAATATC ACCGGAACCC AGCCAAACAA AGACGCTCAA 
1800
AATAAGACCT TTAATGGAAA CACTAACAAA CCCACATCAT CATCCTCCAT 
1850
GGTTGTCTCA GTGTTACTTG ATCCAAGAGA GGTCGTTGAC TCTGAAACCG 
1900
ACAGAGTGGT TCCCCCAAAC CCAAAATCAC TTTCCCGGAT CTTTGTGGTG 
1950
GTGCTTCTTG ACAGTGTCAA GTACGTTACC TACTCATGCG TTCTTCCTCG 
2000
ATCGGGTCTC CATCTCGTAG CCACCTGA
2050

>AT3G10800.1 longest ORF length:675
MTESTSVVAP PPEIPNLNPS MFSESDLFSI PPLDPLFLSD SDPISMDAPI 
50
SDLDFLLDDE NGDFADFDFS FDNSDDFFDF DLSEPAVVIP EEIGNNRSNL 
100
DSSENRSGDG GLEGRSESVH SQVSSQGSKT FVSDTVDASS SPESSNHQKS 
150
SVSKRKKENG DSSGELRSCK YQKSDDKSVA TNNEGDDDDD KRKLIRQIRN 
200
RESAQLSRLR KKQQTEELER KVKSMNATIA ELNGKIAYVM AENVALRQQM 
250
AVASGAPPMN PYMAAPPLPY QWMPYPPYPV RGYGSQTPLV PIPKLNPKPV 
300
SSCRPKKAES KKNEGKSKLK KVASISFIGI LFFVFLFGTL VPFMNVNFGG 
350
ERGSFGGLSK YDGHRYYDEH KGRVLMVGDG SDVRRNSGIS EGNIHSSRIS 
400
HGERDSCGGV DYNAHPKVEG RPSSLSNASD PLFASLYVPR NDGLVKIDGN 
450
LIIHSVLASE KARGLGKKNI TETVKTKEPD LTIPGALSSA LAVPGVRGNA 
500
AMLPHSTALS SEGKRLHQWF HEGGSGPLMD YSMCTEVFQF DIAPGAIVPS 
550
SVSSISAEHL QNVTTHGKRM KNRRILEGLP VSLVASELNI TGTQPNKDAQ 
600
NKTFNGNTNK PTSSSSMVVS VLLDPREVVD SETDRVVPPN PKSLSRIFVV 
650
VLLDSVKYVT YSCVLPRSGL HLVAT
700