fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G11020 DREB2B DEHYDRATION-RESPONSIVE ELEMENT BINDING PROTEIN 2, DRE/CRT-binding protein 2B (.1)

>AT3G11020.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, XbaI
Name Recognition sequence Cut positions
BamHI G|GATCC 819
EcoRI G|AATTC 606
HindIII A|AGCTT 122
PvuII CAG|CTG 739
SpeI A|CTAGT 424
StyI C|C[AT][AT]GG 781, 852
XhoI C|TCGAG 56, 940


Click here to view TAIR data

>AT3G11020.1 length:993
ATGGCTGTAT ATGAACAAAC CGGAACCGAG CAGCCGAAGA AAAGGAAATC 
50
TAGGGCTCGA GCAGGTGGTT TAACGGTGGC TGATAGGCTA AAGAAGTGGA 
100
AAGAGTACAA CGAGATTGTT GAAGCTTCGG CTGTTAAAGA AGGAGAGAAA 
150
CCGAAACGCA AAGTTCCTGC GAAAGGGTCG AAGAAAGGTT GTATGAAGGG 
200
TAAAGGAGGA CCAGATAATT CTCACTGTAG TTTTAGAGGA GTTAGACAAA 
250
GGATTTGGGG TAAATGGGTT GCAGAGATTC GAGAACCGAA AATAGGAACT 
300
AGACTTTGGC TTGGTACTTT TCCTACCGCG GAAAAAGCTG CTTCCGCTTA 
350
TGATGAAGCG GCTACCGCTA TGTACGGTTC ATTGGCTCGT CTTAACTTCC 
400
CTCAGTCTGT TGGGTCTGAG TTTACTAGTA CGTCTAGTCA ATCTGAGGTG 
450
TGTACGGTTG AAAATAAGGC GGTTGTTTGT GGTGATGTTT GTGTGAAGCA 
500
TGAAGATACT GATTGTGAAT CTAATCCATT TAGTCAGATT TTAGATGTTA 
550
GAGAAGAGTC TTGTGGAACC AGGCCGGACA GTTGCACGGT TGGACATCAA 
600
GATATGAATT CTTCGCTGAA TTACGATTTG CTGTTAGAGT TTGAGCAGCA 
650
GTATTGGGGC CAAGTTTTGC AGGAGAAAGA GAAACCGAAG CAGGAAGAAG 
700
AGGAGATACA GCAACAGCAA CAGGAACAGC AACAGCAACA GCTGCAACCG 
750
GATTTGCTTA CTGTTGCAGA TTACGGTTGG CCTTGGTCTA ATGATATTGT 
800
AAATGATCAG ACTTCTTGGG ATCCTAATGA GTGCTTTGAT ATTAATGAAC 
850
TCCTTGGAGA TTTGAATGAA CCTGGTCCCC ATCAGAGCCA AGACCAAAAC 
900
CACGTAAATT CTGGTAGTTA TGATTTGCAT CCGCTTCATC TCGAGCCACA 
950
CGATGGTCAC GAGTTCAATG GTTTGAGTTC TCTGGATATT TGA
1000

>AT3G11020.1 longest ORF length:330
MAVYEQTGTE QPKKRKSRAR AGGLTVADRL KKWKEYNEIV EASAVKEGEK 
50
PKRKVPAKGS KKGCMKGKGG PDNSHCSFRG VRQRIWGKWV AEIREPKIGT 
100
RLWLGTFPTA EKAASAYDEA ATAMYGSLAR LNFPQSVGSE FTSTSSQSEV 
150
CTVENKAVVC GDVCVKHEDT DCESNPFSQI LDVREESCGT RPDSCTVGHQ 
200
DMNSSLNYDL LLEFEQQYWG QVLQEKEKPK QEEEEIQQQQ QEQQQQQLQP 
250
DLLTVADYGW PWSNDIVNDQ TSWDPNECFD INELLGDLNE PGPHQSQDQN 
300
HVNSGSYDLH PLHLEPHDGH EFNGLSSLDI 
350