Locus |
Common name |
Short description |
AT3G11090 |
LBD21 |
LOB domain-containing protein 21 (.1) |
>AT3G11090.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccII(FnuDII), AccIII(BspMII), AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvaII, AvrII, BaeI, BalI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, Bsp1286I, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BsrI, BssHII, BssKI, BssSI, BstAPI, BstBI, BstEII, BstNI, BstUI, BstXI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cfr10I, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HaeIII, HgaI, HhaI, HinP1I, HpaII, HphI, Hpy188I, Hpy99I, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MslI, MspA1I, MspI, N.BstNBI, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PvuI, PvuII, RsrII, SacI, SacII, SalI, SapI, Sau96I, SbfI, ScaI, ScrFI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, Tsp509I, TspRI, Tth111I, XbaI, XmaI, XmnI
Name |
Recognition sequence |
Cut positions |
AccI
| GT|[AC][TG]AC |
444 |
AciI
| C|CGC |
94 |
AluI
| AG|CT |
23, 45, 159, 220, 294, 310, 387 |
AvaI
| C|PyCGPuG |
292 |
BamHI
| G|GATCC |
240 |
BfaI
| C|TAG |
308 |
BsaJI
| C|CNNGG |
209 |
BslI
| CCNNNNN|NNGG |
249, 343 |
BsoBI
| C|PyCGPuG |
292 |
BstF5I
| GGATGNN| |
376 |
BstYI
| Pu|GATCPy |
240 |
Cac8I
| GCN|NGC |
40, 145, 319, 390 |
DdeI
| C|TNAG |
223, 385 |
DpnI
| GA-CH3|TC |
18, 239, 305, 404, 470 |
DpnII
| |GATC |
18, 239, 305, 404, 470 |
Fnu4HI
| GC|NGC |
36, 393 |
HincII
| GTPy|PuAC |
202, 349 |
HindIII
| A|AGCTT |
160 |
HinfI
| G|ANTC |
378 |
HpaI
| GTT|AAC |
202 |
HpyCH4III
| ACN|GT |
198, 250 |
HpyCH4IV
| A|CGT |
150 |
HpyCH4V
| TG|CA |
34, 41, 62, 74, 254, 276 |
MboI
| |GATC |
18, 239, 305, 404, 470 |
MseI
| T|TAA |
201 |
MwoI
| GCNNNNN|NNGC |
219 |
NlaIII
| CATG| |
8 |
NlaIV
| GGN|NCC |
142, 240, 262 |
PaeR7I
| C|TCGAG |
292 |
PstI
| CTGCA|G |
277 |
RsaI
| GT|AC |
410 |
Sau3AI
| |GATC |
18, 239, 305, 404, 470 |
SfcI
| C|TPuPyAG |
277 |
SmlI
| C|TPyPuAG |
99, 235, 292 |
StyI
| C|C[AT][AT]GG |
209 |
Taqƒ¿I
| T|CGA |
291, 325 |
TfiI
| G|A[AT]TC |
378 |
TliI
| C|TCGAG |
292 |
TseI
| G|C[AT]GC |
36, 393 |
Tsp45I
| |GT[CG]AC |
103, 421 |
XcmI
| CCANNNNN|NNNNTGG |
138 |
XhoI
| C|TCGAG |
292 |
Click here to view TAIR data
>AT3G11090.1 length:498
ATGAGAGGGC ATGAGCCACG ATCAAGCTCA TCTTGTGCAG CCTGCAAGCT | 50 |
CTTGAAGAGA CGATGCACAC CCACTTGCAT TTTCGCTCCT TATTTCCGCT | 100 |
CAAGTGACTT GATAACTTTC GCCAAAGTCC ATAAAGTCTT TGGAGCCAGC | 150 |
AACGTCAGTA AGCTTCTCGG TGAAGTTCCT GAAGAACAGA GACAAGAAAC | 200 |
CGTTAACTCC TTGGCTTATG AAGCTGAGGT TCGTCTCAAG GATCCTGTTT | 250 |
ACGGTTGCAT TGGAGCCATA GCGTCTCTGC AGAAGAAGAT GCTCGAGCTT | 300 |
CAACACGATC TAGCTGTTGC TCGCACTCGA CTACTTGCCC ATTCTGGGGT | 350 |
CAACAACAGC CAAGTGTCCC CTTTGGATGA TTCTCCTGAG CTTGCTGCTT | 400 |
TTCTTGATCT TGTACCTTAT AGTGACTTGA TGTTGCTTGA TGGGTCTACT | 450 |
AATCTTGATG CTTACTTGTA TGATCTTGGA CAGCCTCCTT TTGTATAG | 500 |
>AT3G11090.1 longest ORF length:165
MRGHEPRSSS SCAACKLLKR RCTPTCIFAP YFRSSDLITF AKVHKVFGAS | 50 |
NVSKLLGEVP EEQRQETVNS LAYEAEVRLK DPVYGCIGAI ASLQKKMLEL | 100 |
QHDLAVARTR LLAHSGVNNS QVSPLDDSPE LAAFLDLVPY SDLMLLDGST | 150 |
NLDAYLYDLG QPPFV | 200 |
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