Locus |
Common name |
Short description |
AT3G11260 |
WOX5B, WOX5 |
WUSCHEL related homeobox 5B, WUSCHEL related homeobox 5 (.1) |
>AT3G11260.1 CDS map
>>Show genomic map

Uncut enzymes: Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaI, AvaII, AvrII, BaeI, BalI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BlpI, BmrI, BpmI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BslI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrGI, BsrI, BssHII, BssKI, BssSI, BstAPI, BstBI, BstEII, BstF5I, BstNI, BstUI, BstXI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cac8I, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRV, FauI, Fnu4HI, FokI, FseI, FspI, HaeII, HaeIII, HgaI, HhaI, HinP1I, HincII, HpaI, HphI, HpyCH4V, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MslI, MspA1I, N.BstNBI, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NheI, NlaIV, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, PvuII, RsrII, SacII, SalI, SapI, Sau96I, SbfI, ScaI, ScrFI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SmlI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, TliI, TseI, Tsp45I, TspRI, Tth111I, XbaI, XhoI, XmaI
Name |
Recognition sequence |
Cut positions |
AatII
| GACGT|C |
468 |
AciI
| C|CGC |
515 |
AluI
| AG|CT |
23, 168, 418, 496, 536 |
ApoI
| Pu|AATTPy |
378 |
BanII
| GPuGCPy|C |
169 |
BclI
| T|GATCA |
144, 273 |
BfaI
| C|TAG |
231, 297, 420 |
BglII
| A|GATCT |
158, 525 |
BsaAI
| PyAC|GTPu |
29 |
BsaBI
| GATNN|NNATC |
272 |
BsaHI
| GPu|CGPyC |
468 |
BsaJI
| C|CNNGG |
401 |
BsaWI
| [AT]|CCGG[AT] |
372 |
BsiHKAI
| G[AT]GC[AT]|C |
169 |
Bsp1286I
| G[GAT]GC[CAT]|C |
169 |
BsrFI
| Pu|CCGGPy |
121 |
BstYI
| Pu|GATCPy |
158, 525 |
Cfr10I
| [AG]|CCGG[TC] |
121 |
DdeI
| C|TNAG |
126, 171 |
DpnI
| GA-CH3|TC |
107, 143, 157, 272, 524 |
DpnII
| |GATC |
107, 143, 157, 272, 524 |
EcoRI
| G|AATTC |
378 |
HindIII
| A|AGCTT |
24, 537 |
HinfI
| G|ANTC |
74, 149, 221, 390 |
HpaII
| C|CGG |
120, 371 |
Hpy188I
| TCN|GA |
146, 152, 218 |
Hpy99I
| CG[AT]CG| |
249, 466 |
HpyCH4III
| ACN|GT |
81, 439 |
HpyCH4IV
| A|CGT |
28, 247, 467 |
MboI
| |GATC |
107, 143, 157, 272, 524 |
MseI
| T|TAA |
533, 544 |
MspI
| C|CGG |
120, 371 |
MwoI
| GCNNNNN|NNGC |
31 |
NlaIII
| CATG| |
489 |
RsaI
| GT|AC |
436 |
SacI
| GAGCT|C |
169 |
Sau3AI
| |GATC |
107, 143, 157, 272, 524 |
StyI
| C|C[AT][AT]GG |
401 |
Taqƒ¿I
| T|CGA |
19, 115, 451, 529 |
TfiI
| G|A[AT]TC |
74, 149, 221 |
Tsp509I
| |AATT |
377 |
XcmI
| CCANNNNN|NNNNTGG |
404 |
XmnI
| GAANN|NNTTC |
205, 449 |
Click here to view TAIR data
>AT3G11260.1 length:549
ATGTCTTTCT CCGTGAAAGG TCGAAGCTTA CGTGGCAACA ATAACGGAGG | 50 |
AACGGGGACG AAGTGCGGGA GATGGAATCC AACGGTGGAG CAGTTGAAGA | 100 |
TATTGACTGA TCTGTTTCGA GCCGGTCTTA GAACTCCAAC AACTGATCAG | 150 |
ATTCAGAAGA TCTCTACGGA GCTCAGTTTC TACGGCAAGA TAGAGAGCAA | 200 |
GAATGTTTTC TATTGGTTTC AGAATCATAA GGCTAGGGAG AGGCAGAAAC | 250 |
GTCGTAAAAT CTCCATTGAT TTTGATCATC ATCATCATCA ACCATCAACT | 300 |
AGAGATGTTT TTGAAATAAG CGAAGAAGAT TGTCAAGAGG AAGAGAAGGT | 350 |
GATAGAGACA TTACAACTCT TTCCGGTGAA TTCATTTGAA GACTCCAACT | 400 |
CCAAGGTGGA CAAAATGAGA GCTAGAGGCA ATAACCAGTA CCGTGAATAT | 450 |
ATTCGAGAGA CCACCACGAC GTCGTTTTCT CCATACTCAT CATGTGGAGC | 500 |
TGAAATGGAA CATCCACCGC CATTAGATCT TCGATTAAGC TTTCTTTAA | 550 |
>AT3G11260.1 longest ORF length:182
MSFSVKGRSL RGNNNGGTGT KCGRWNPTVE QLKILTDLFR AGLRTPTTDQ | 50 |
IQKISTELSF YGKIESKNVF YWFQNHKARE RQKRRKISID FDHHHHQPST | 100 |
RDVFEISEED CQEEEKVIET LQLFPVNSFE DSNSKVDKMR ARGNNQYREY | 150 |
IRETTTTSFS PYSSCGAEME HPPPLDLRLS FL | 200 |
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