Locus |
Common name |
Short description |
AT3G11280 |
|
Duplicated homeodomain-like superfamily protein (.1.2) |
>AT3G11280.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SalI, SmaI, SpeI, XbaI
Name |
Recognition sequence |
Cut positions |
HindIII
| A|AGCTT |
229 |
PstI
| CTGCA|G |
287 |
SacI
| GAGCT|C |
128 |
StyI
| C|C[AT][AT]GG |
302, 382, 539 |
XhoI
| C|TCGAG |
81 |
Click here to view TAIR data
>AT3G11280.1 length:792
ATGGAGACTC TGCATCCATT CTCTCACCTA CCTATCTCTG ACCACCGGTT | 50 |
CGTTGTTCAA GAGATGGTGA GCTTACACAG CTCGAGTAGC GGTAGCTGGA | 100 |
CTAAAGAAGA GAACAAGATG TTCGAACGAG CTCTTGCGAT ATACGCTGAA | 150 |
GACTCGCCTG ATCGCTGGTT TAAAGTTGCT TCCATGATCC CTGGAAAGAC | 200 |
TGTTTTTGAT GTTATGAAGC AATATAGTAA GCTTGAAGAA GACGTTTTCG | 250 |
ATATTGAAGC AGGACGTGTT CCCATTCCTG GTTATCCTGC AGCTTCTTCT | 300 |
CCCTTGGGGT TTGACACGGA CATGTGTCGT AAACGGCCTA GTGGAGCTAG | 350 |
AGGATCTGAT CAAGATCGAA AGAAAGGAGT CCCTTGGACA GAGGAAGAAC | 400 |
ACAGGAGATT CTTGTTAGGC CTTCTCAAGT ACGGTAAAGG AGATTGGAGA | 450 |
AACATATCGA GAAACTTCGT GGTGTCAAAG ACGCCAACGC AAGTGGCGAG | 500 |
CCACGCCCAA AAGTATTACC AGAGACAGCT CTCCGGAGCC AAGGACAAAC | 550 |
GCAGGCCAAG TATCCATGAC ATCACAACCG GCAATCTTCT CAATGCCAAT | 600 |
CTCAACCGTT CCTTTTCCGA TCATAGAGAT ATTCTCCCTG ATTTAGGGTT | 650 |
TATCGATAAG GATGATACGG AGGAGGGAGT AATATTTATG GGTCAGAATC | 700 |
TCTCTTCAGA AAATCTGTTT TCTCCATCAC CAACTTCATT CGAAGCTGCC | 750 |
ATTAACTTCG CCGGAGAAAA TGTCTTCAGT GCCGGAGCTT AA | 800 |
>AT3G11280.1 longest ORF length:263
METLHPFSHL PISDHRFVVQ EMVSLHSSSS GSWTKEENKM FERALAIYAE | 50 |
DSPDRWFKVA SMIPGKTVFD VMKQYSKLEE DVFDIEAGRV PIPGYPAASS | 100 |
PLGFDTDMCR KRPSGARGSD QDRKKGVPWT EEEHRRFLLG LLKYGKGDWR | 150 |
NISRNFVVSK TPTQVASHAQ KYYQRQLSGA KDKRRPSIHD ITTGNLLNAN | 200 |
LNRSFSDHRD ILPDLGFIDK DDTEEGVIFM GQNLSSENLF SPSPTSFEAA | 250 |
INFAGENVFS AGA | 300 |
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