fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G11580 AP2/B3-like transcriptional factor family protein (.1.2)

>AT3G11580.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI
Name Recognition sequence Cut positions
HindIII A|AGCTT 431
XhoI C|TCGAG 627


Click here to view TAIR data

>AT3G11580.1 length:804
ATGTCAGTCA ACCATTACCA CAACACTCTC TCGTTGCATC ATCACCACCA 
50
AAACGACGTA GCTATAGCAC AACGAGAGTC TTTGTTCGAG AAATCACTCA 
100
CACCAAGCGA CGTCGGAAAG CTAAACCGCT TAGTCATACC AAAACAACAC 
150
GCCGAGAAAT ACTTCCCTCT CAATAATAAT AATAATAATG GCGGCAGCGG 
200
AGATGACGTG GCGACGACGG AGAAAGGGAT GCTTCTTAGC TTCGAGGATG 
250
AGTCAGGCAA GTGTTGGAAA TTCAGATACT CTTATTGGAA CAGTAGCCAA 
300
AGCTACGTGT TGACCAAAGG ATGGAGCAGG TACGTCAAAG ACAAACACCT 
350
CGACGCAGGC GACGTTGTTT TCTTTCAACG TCACCGTTTT GATCTCCATA 
400
GACTCTTCAT TGGCTGGCGG AGACGCGGTG AAGCTTCTTC CTCTCCCGCT 
450
GTCTCCGTTG TGTCTCAAGA AGCTCTAGTT AATACGACGG CGTATTGGAG 
500
CGGCTTGACT ACACCTTATC GTCAAGTACA CGCGTCAACT ACTTACCCTA 
550
ATATTCACCA AGAGTATTCA CACTATGGCG CCGTCGTTGA TCATGCTCAG 
600
TCGATACCAC CGGTGGTCGC AGGTAGCTCG AGGACGGTGA GGCTTTTTGG 
650
CGTGAACCTC GAATGTCATG GTGATGCCGT CGAGCCACCA CCGCGTCCTG 
700
ATGTCTATAA TGACCAACAC ATTTACTATT ACTCAACTCC TCATCCCATG 
750
AATATATCAT TTGCTGGGGA AGCATTGGAG CAGGTAGGAG ATGGACGAGG 
800
TTGA
850

>AT3G11580.1 longest ORF length:267
MSVNHYHNTL SLHHHHQNDV AIAQRESLFE KSLTPSDVGK LNRLVIPKQH 
50
AEKYFPLNNN NNNGGSGDDV ATTEKGMLLS FEDESGKCWK FRYSYWNSSQ 
100
SYVLTKGWSR YVKDKHLDAG DVVFFQRHRF DLHRLFIGWR RRGEASSSPA 
150
VSVVSQEALV NTTAYWSGLT TPYRQVHAST TYPNIHQEYS HYGAVVDHAQ 
200
SIPPVVAGSS RTVRLFGVNL ECHGDAVEPP PRPDVYNDQH IYYYSTPHPM 
250
NISFAGEALE QVGDGRG
300