fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G11580 AP2/B3-like transcriptional factor family protein (.1.2)

>AT3G11580.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 431


Click here to view TAIR data

>AT3G11580.2 length:693
ATGTCAGTCA ACCATTACCA CAACACTCTC TCGTTGCATC ATCACCACCA 
50
AAACGACGTA GCTATAGCAC AACGAGAGTC TTTGTTCGAG AAATCACTCA 
100
CACCAAGCGA CGTCGGAAAG CTAAACCGCT TAGTCATACC AAAACAACAC 
150
GCCGAGAAAT ACTTCCCTCT CAATAATAAT AATAATAATG GCGGCAGCGG 
200
AGATGACGTG GCGACGACGG AGAAAGGGAT GCTTCTTAGC TTCGAGGATG 
250
AGTCAGGCAA GTGTTGGAAA TTCAGATACT CTTATTGGAA CAGTAGCCAA 
300
AGCTACGTGT TGACCAAAGG ATGGAGCAGG TACGTCAAAG ACAAACACCT 
350
CGACGCAGGC GACGTTGTTT TCTTTCAACG TCACCGTTTT GATCTCCATA 
400
GACTCTTCAT TGGCTGGCGG AGACGCGGTG AAGCTTCTTC CTCTCCCGCT 
450
GTCTCCGTTG TGTCTCAAGA AGCTCTAGTT AATACGACGG CGTATTGGAG 
500
CGGCTTGACT ACACCTTATC GTCAAGTACA CGCGTCAACT ACTTACCCTA 
550
ATATTCACCA AGAGTATTCA CACTATGGTA AATTCAAACC CTTTATTTCC 
600
TCTTTTGTTT TTTCTTTCTC TCTTATCTAT ATGTCAGATT TATACTCCTC 
650
TCTGTTCTCT TTTAAGATTT GTCTTTTTCA TAAAAATAGA TGA
700

>AT3G11580.2 longest ORF length:230
MSVNHYHNTL SLHHHHQNDV AIAQRESLFE KSLTPSDVGK LNRLVIPKQH 
50
AEKYFPLNNN NNNGGSGDDV ATTEKGMLLS FEDESGKCWK FRYSYWNSSQ 
100
SYVLTKGWSR YVKDKHLDAG DVVFFQRHRF DLHRLFIGWR RRGEASSSPA 
150
VSVVSQEALV NTTAYWSGLT TPYRQVHAST TYPNIHQEYS HYGKFKPFIS 
200
SFVFSFSLIY MSDLYSSLFS FKICLFHKNR 
250