fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G12130 KH domain-containing protein / zinc finger (CCCH type) family protein (.1)

>AT3G12130.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions


Click here to view TAIR data

>AT3G12130.1 length:747
ATGGATACTC GTAAGAGAGG ACGGCCTGAA GCTGGCTCAT TCAACTCCAA 
50
TGGCGGCGGA TACAAGAAGT CTAAGCAAGA GATGGAATCA TATTCAACTG 
100
GTTTAGGAAG CAAATCGAAG CCATGCACAA AATTTTTCAG TACTTCTGGC 
150
TGTCCTTTCG GAGAGAATTG CCATTTCTTG CATTATGTTC CCGGAGGATA 
200
CAATGCTGTA TCGCAGATGA CAAATATGGG ACCACCCATT CCTCAAGTTT 
250
CCAGAAACAT GCAAGGTTCT GGTAATGGAG GCCGATTCTC AGGGAGGGGA 
300
GAGTCTGGGC CTGGCCATGT CTCTAACTTT GGTGACTCAG CCACTGCCAG 
350
ATTCAGTGTT GATGCCTCTT TAGCCGGTGC AATCATTGGG AAAGGCGGAG 
400
TCAGTTCAAA GCAGATATGT CGTCAGACGG GAGTAAAATT ATCAATTCAA 
450
GATCACGAGA GAGACCCAAA CTTGAAGAAC ATTGTGCTTG AAGGAACACT 
500
TGAGCAGATA AGCGAAGCGA GTGCAATGGT AAAAGATTTG ATTGGGAGGC 
550
TTAATTCAGC AGCTAAGAAA CCACCTGGTG GTGGTCTTGG TGGTGGTGGT 
600
GGCATGGGTT CTGAAGGGAA ACCACATCCA GGGAGCAACT TCAAGACTAA 
650
GATATGTGAG AGATTCTCAA AAGGAAACTG TACATTTGGT GATAGATGTC 
700
ACTTTGCTCA TGGGGAAGCA GAGCTACGCA AGTCAGGAAT CGTCTAG
750

>AT3G12130.1 longest ORF length:248
MDTRKRGRPE AGSFNSNGGG YKKSKQEMES YSTGLGSKSK PCTKFFSTSG 
50
CPFGENCHFL HYVPGGYNAV SQMTNMGPPI PQVSRNMQGS GNGGRFSGRG 
100
ESGPGHVSNF GDSATARFSV DASLAGAIIG KGGVSSKQIC RQTGVKLSIQ 
150
DHERDPNLKN IVLEGTLEQI SEASAMVKDL IGRLNSAAKK PPGGGLGGGG 
200
GMGSEGKPHP GSNFKTKICE RFSKGNCTFG DRCHFAHGEA ELRKSGIV
250