fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G12250 BZIP45, TGA6 TGACG motif-binding factor 6 (.1.2.3.4.5)

>AT3G12250.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NheI, NotI, PacI, PstI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 57, 397
HindIII A|AGCTT 598
NcoI C|CATGG 800
NdeI CA|TATG 79
PvuII CAG|CTG 211, 545
SacI GAGCT|C 430
StyI C|C[AT][AT]GG 800


Click here to view TAIR data

>AT3G12250.1 length:993
ATGGCTGATA CCAGTTCAAG GACTGATGTC TCAACTGATG GTGACACAGA 
50
TCATAGAGAT CTGGGGTCTG ATAGAGGGCA TATGCATGCT GCTGCCTCTG 
100
ATTCCAGTGA TCGATCAAAG GATAAGTTGG ATCAAAAGAC CCTTCGTAGG 
150
CTTGCTCAAA ATCGTGAGGC AGCAAGAAAA AGCAGATTGA GGAAGAAGGC 
200
GTATGTTCAG CAGCTGGAGA ATAGTCGATT AAAGCTGACT CAACTTGAGC 
250
AGGAGCTGCA AAGAGCAAGA CAGCAGGGAG TTTTCATCTC AAGTTCAGGA 
300
GACCAAGCTC ATTCTACTGG TGGCAATGGG GCTTTGGCAT TTGATGCAGA 
350
ACACTCACGA TGGCTTGAAG AAAAGAACAG GCAAATGAAC GAGCTGAGAT 
400
CTGCCCTGAA TGCTCATGCA GGTGATACTG AGCTCCGGAT AATTGTGGAT 
450
GGAGTGATGG CTCACTATGA GGAGCTTTTC AGGATTAAGA GCAATGCAGC 
500
TAAGAATGAT GTCTTCCACT TGTTATCTGG AATGTGGAAA ACACCAGCTG 
550
AGCGATGTTT CTTGTGGCTT GGCGGGTTCC GCTCATCCGA ACTTCTCAAG 
600
CTTCTTGCGA ATCAGCTAGA GCCCATGACA GAACGACAGG TAATGGGCAT 
650
CAATAGCTTG CAGCAGACGT CGCAGCAGGC AGAAGATGCT TTATCTCAAG 
700
GGATGGAGAG TTTACAGCAA TCCCTAGCTG ATACTTTATC CAGTGGAACT 
750
CTTGGTTCCA GTTCATCGGA TAATGTCGCG AGCTACATGG GTCAGATGGC 
800
CATGGCAATG GGGCAGTTAG GCACCCTCGA AGGATTCATA CGCCAGGCTG 
850
ATAACTTGAG GCTGCAAACA CTACAACAGA TGCTTCGAGT ATTAACAACA 
900
CGTCAGTCAG CTCGTGCTCT TCTTGCTATA CACGATTATT CATCTCGATT 
950
ACGTGCTCTT AGTTCCTTGT GGCTTGCCCG GCCAAGAGAG TGA
1000

>AT3G12250.1 longest ORF length:330
MADTSSRTDV STDGDTDHRD LGSDRGHMHA AASDSSDRSK DKLDQKTLRR 
50
LAQNREAARK SRLRKKAYVQ QLENSRLKLT QLEQELQRAR QQGVFISSSG 
100
DQAHSTGGNG ALAFDAEHSR WLEEKNRQMN ELRSALNAHA GDTELRIIVD 
150
GVMAHYEELF RIKSNAAKND VFHLLSGMWK TPAERCFLWL GGFRSSELLK 
200
LLANQLEPMT ERQVMGINSL QQTSQQAEDA LSQGMESLQQ SLADTLSSGT 
250
LGSSSSDNVA SYMGQMAMAM GQLGTLEGFI RQADNLRLQT LQQMLRVLTT 
300
RQSARALLAI HDYSSRLRAL SSLWLARPRE 
350