fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G12250 BZIP45, TGA6 TGACG motif-binding factor 6 (.1.2.3.4.5)

>AT3G12250.3 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NheI, NotI, PacI, PstI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 379
HindIII A|AGCTT 580
NcoI C|CATGG 782
NdeI CA|TATG 61
PvuII CAG|CTG 193, 527
SacI GAGCT|C 412
StyI C|C[AT][AT]GG 782


Click here to view TAIR data

>AT3G12250.3 length:975
ATGCATAGTT TGAATGAAAC AGTAATTCCT GATGTTGATT ACATGCAGTC 
50
TGATAGAGGG CATATGCATG CTGCTGCCTC TGATTCCAGT GATCGATCAA 
100
AGGATAAGTT GGATCAAAAG ACCCTTCGTA GGCTTGCTCA AAATCGTGAG 
150
GCAGCAAGAA AAAGCAGATT GAGGAAGAAG GCGTATGTTC AGCAGCTGGA 
200
GAATAGTCGA TTAAAGCTGA CTCAACTTGA GCAGGAGCTG CAAAGAGCAA 
250
GACAGCAGGG AGTTTTCATC TCAAGTTCAG GAGACCAAGC TCATTCTACT 
300
GGTGGCAATG GGGCTTTGGC ATTTGATGCA GAACACTCAC GATGGCTTGA 
350
AGAAAAGAAC AGGCAAATGA ACGAGCTGAG ATCTGCCCTG AATGCTCATG 
400
CAGGTGATAC TGAGCTCCGG ATAATTGTGG ATGGAGTGAT GGCTCACTAT 
450
GAGGAGCTTT TCAGGATTAA GAGCAATGCA GCTAAGAATG ATGTCTTCCA 
500
CTTGTTATCT GGAATGTGGA AAACACCAGC TGAGCGATGT TTCTTGTGGC 
550
TTGGCGGGTT CCGCTCATCC GAACTTCTCA AGCTTCTTGC GAATCAGCTA 
600
GAGCCCATGA CAGAACGACA GGTAATGGGC ATCAATAGCT TGCAGCAGAC 
650
GTCGCAGCAG GCAGAAGATG CTTTATCTCA AGGGATGGAG AGTTTACAGC 
700
AATCCCTAGC TGATACTTTA TCCAGTGGAA CTCTTGGTTC CAGTTCATCG 
750
GATAATGTCG CGAGCTACAT GGGTCAGATG GCCATGGCAA TGGGGCAGTT 
800
AGGCACCCTC GAAGGATTCA TACGCCAGGC TGATAACTTG AGGCTGCAAA 
850
CACTACAACA GATGCTTCGA GTATTAACAA CACGTCAGTC AGCTCGTGCT 
900
CTTCTTGCTA TACACGATTA TTCATCTCGA TTACGTGCTC TTAGTTCCTT 
950
GTGGCTTGCC CGGCCAAGAG AGTGA
1000

>AT3G12250.3 longest ORF length:324
MHSLNETVIP DVDYMQSDRG HMHAAASDSS DRSKDKLDQK TLRRLAQNRE 
50
AARKSRLRKK AYVQQLENSR LKLTQLEQEL QRARQQGVFI SSSGDQAHST 
100
GGNGALAFDA EHSRWLEEKN RQMNELRSAL NAHAGDTELR IIVDGVMAHY 
150
EELFRIKSNA AKNDVFHLLS GMWKTPAERC FLWLGGFRSS ELLKLLANQL 
200
EPMTERQVMG INSLQQTSQQ AEDALSQGME SLQQSLADTL SSGTLGSSSS 
250
DNVASYMGQM AMAMGQLGTL EGFIRQADNL RLQTLQQMLR VLTTRQSARA 
300
LLAIHDYSSR LRALSSLWLA RPRE
350