fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G12250 BZIP45, TGA6 TGACG motif-binding factor 6 (.1.2.3.4.5)

>AT3G12250.4 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NheI, NotI, PacI, PstI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 57, 472
HindIII A|AGCTT 673
NcoI C|CATGG 875
NdeI CA|TATG 154
PvuII CAG|CTG 286, 620
SacI GAGCT|C 505
StyI C|C[AT][AT]GG 114, 875


Click here to view TAIR data

>AT3G12250.4 length:1068
ATGGCTGATA CCAGTTCAAG GACTGATGTC TCAACTGATG GTGACACAGA 
50
TCATAGAGAT CTGGGGTTTT ATTATCTCTA CAATGTCACT CCTGGGAGGC 
100
TTGTACCGGA ATCCCTTGGT AAAACTTGGG GCATTCTACC GTCTGATAGA 
150
GGGCATATGC ATGCTGCTGC CTCTGATTCC AGTGATCGAT CAAAGGATAA 
200
GTTGGATCAA AAGACCCTTC GTAGGCTTGC TCAAAATCGT GAGGCAGCAA 
250
GAAAAAGCAG ATTGAGGAAG AAGGCGTATG TTCAGCAGCT GGAGAATAGT 
300
CGATTAAAGC TGACTCAACT TGAGCAGGAG CTGCAAAGAG CAAGACAGCA 
350
GGGAGTTTTC ATCTCAAGTT CAGGAGACCA AGCTCATTCT ACTGGTGGCA 
400
ATGGGGCTTT GGCATTTGAT GCAGAACACT CACGATGGCT TGAAGAAAAG 
450
AACAGGCAAA TGAACGAGCT GAGATCTGCC CTGAATGCTC ATGCAGGTGA 
500
TACTGAGCTC CGGATAATTG TGGATGGAGT GATGGCTCAC TATGAGGAGC 
550
TTTTCAGGAT TAAGAGCAAT GCAGCTAAGA ATGATGTCTT CCACTTGTTA 
600
TCTGGAATGT GGAAAACACC AGCTGAGCGA TGTTTCTTGT GGCTTGGCGG 
650
GTTCCGCTCA TCCGAACTTC TCAAGCTTCT TGCGAATCAG CTAGAGCCCA 
700
TGACAGAACG ACAGGTAATG GGCATCAATA GCTTGCAGCA GACGTCGCAG 
750
CAGGCAGAAG ATGCTTTATC TCAAGGGATG GAGAGTTTAC AGCAATCCCT 
800
AGCTGATACT TTATCCAGTG GAACTCTTGG TTCCAGTTCA TCGGATAATG 
850
TCGCGAGCTA CATGGGTCAG ATGGCCATGG CAATGGGGCA GTTAGGCACC 
900
CTCGAAGGAT TCATACGCCA GGCTGATAAC TTGAGGCTGC AAACACTACA 
950
ACAGATGCTT CGAGTATTAA CAACACGTCA GTCAGCTCGT GCTCTTCTTG 
1000
CTATACACGA TTATTCATCT CGATTACGTG CTCTTAGTTC CTTGTGGCTT 
1050
GCCCGGCCAA GAGAGTGA
1100

>AT3G12250.4 longest ORF length:355
MADTSSRTDV STDGDTDHRD LGFYYLYNVT PGRLVPESLG KTWGILPSDR 
50
GHMHAAASDS SDRSKDKLDQ KTLRRLAQNR EAARKSRLRK KAYVQQLENS 
100
RLKLTQLEQE LQRARQQGVF ISSSGDQAHS TGGNGALAFD AEHSRWLEEK 
150
NRQMNELRSA LNAHAGDTEL RIIVDGVMAH YEELFRIKSN AAKNDVFHLL 
200
SGMWKTPAER CFLWLGGFRS SELLKLLANQ LEPMTERQVM GINSLQQTSQ 
250
QAEDALSQGM ESLQQSLADT LSSGTLGSSS SDNVASYMGQ MAMAMGQLGT 
300
LEGFIRQADN LRLQTLQQML RVLTTRQSAR ALLAIHDYSS RLRALSSLWL 
350
ARPRE
400