|
|
|
|
|
|
|
|
| Locus | Common name | Short description |
| AT3G12250 | BZIP45, TGA6 | TGACG motif-binding factor 6 (.1.2.3.4.5) |
>AT3G12250.5 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, SalI, SmaI, SpeI, XbaI, XhoI
| Name | Recognition sequence | Cut positions |
| BglII | A|GATCT | 316 |
| HindIII | A|AGCTT | 517 |
| NcoI | C|CATGG | 719 |
| PvuII | CAG|CTG | 130, 464 |
| SacI | GAGCT|C | 349 |
| StyI | C|C[AT][AT]GG | 719 |
Click here to view TAIR data
>AT3G12250.5 length:912
ATGCATGCTG CTGCCTCTGA TTCCAGTGAT CGATCAAAGG ATAAGTTGGA | 50 |
TCAAAAGACC CTTCGTAGGC TTGCTCAAAA TCGTGAGGCA GCAAGAAAAA | 100 |
GCAGATTGAG GAAGAAGGCG TATGTTCAGC AGCTGGAGAA TAGTCGATTA | 150 |
AAGCTGACTC AACTTGAGCA GGAGCTGCAA AGAGCAAGAC AGCAGGGAGT | 200 |
TTTCATCTCA AGTTCAGGAG ACCAAGCTCA TTCTACTGGT GGCAATGGGG | 250 |
CTTTGGCATT TGATGCAGAA CACTCACGAT GGCTTGAAGA AAAGAACAGG | 300 |
CAAATGAACG AGCTGAGATC TGCCCTGAAT GCTCATGCAG GTGATACTGA | 350 |
GCTCCGGATA ATTGTGGATG GAGTGATGGC TCACTATGAG GAGCTTTTCA | 400 |
GGATTAAGAG CAATGCAGCT AAGAATGATG TCTTCCACTT GTTATCTGGA | 450 |
ATGTGGAAAA CACCAGCTGA GCGATGTTTC TTGTGGCTTG GCGGGTTCCG | 500 |
CTCATCCGAA CTTCTCAAGC TTCTTGCGAA TCAGCTAGAG CCCATGACAG | 550 |
AACGACAGGT AATGGGCATC AATAGCTTGC AGCAGACGTC GCAGCAGGCA | 600 |
GAAGATGCTT TATCTCAAGG GATGGAGAGT TTACAGCAAT CCCTAGCTGA | 650 |
TACTTTATCC AGTGGAACTC TTGGTTCCAG TTCATCGGAT AATGTCGCGA | 700 |
GCTACATGGG TCAGATGGCC ATGGCAATGG GGCAGTTAGG CACCCTCGAA | 750 |
GGATTCATAC GCCAGGCTGA TAACTTGAGG CTGCAAACAC TACAACAGAT | 800 |
GCTTCGAGTA TTAACAACAC GTCAGTCAGC TCGTGCTCTT CTTGCTATAC | 850 |
ACGATTATTC ATCTCGATTA CGTGCTCTTA GTTCCTTGTG GCTTGCCCGG | 900 |
CCAAGAGAGT GA | 950 |
>AT3G12250.5 longest ORF length:303
MHAAASDSSD RSKDKLDQKT LRRLAQNREA ARKSRLRKKA YVQQLENSRL | 50 |
KLTQLEQELQ RARQQGVFIS SSGDQAHSTG GNGALAFDAE HSRWLEEKNR | 100 |
QMNELRSALN AHAGDTELRI IVDGVMAHYE ELFRIKSNAA KNDVFHLLSG | 150 |
MWKTPAERCF LWLGGFRSSE LLKLLANQLE PMTERQVMGI NSLQQTSQQA | 200 |
EDALSQGMES LQQSLADTLS SGTLGSSSSD NVASYMGQMA MAMGQLGTLE | 250 |
GFIRQADNLR LQTLQQMLRV LTTRQSARAL LAIHDYSSRL RALSSLWLAR | 300 |
PRE | 350 |