fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G12680 HUA1 ENHANCER OF AG-4 1, floral homeotic protein (HUA1) (.1)

>AT3G12680.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, KpnI, NcoI, NdeI, NheI, NotI, PacI, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 187
EcoRV GAT|ATC 886
HindIII A|AGCTT 194, 443
HpaI GTT|AAC 933
PstI CTGCA|G 582, 764
PvuII CAG|CTG 286
StyI C|C[AT][AT]GG 1173


Click here to view TAIR data

>AT3G12680.1 length:1575
ATGGCACATC GTCAATTGTA TAGCTACGCC CTTCAACCTT CTTATGCTGC 
50
TGCTGCCTCC ACCGTATCTC CAGCTCCTCC TCCGCCGCAA CAACCACTGC 
100
CGCCAAAAAC CGGTCTTTCT TCTCTCTACG GTTCTTCTGC TGACCATTAC 
150
TTTCCGGATA CCACGTATCG TTTCTTAGCT CGTGATGGAT CCGAAGCTTT 
200
GAGCAACTAT TCAGGGACTC TTGCATCGTC TTCCTCTATG TACCATCATT 
250
TGCCTAACAC GACGGCATCG CATTTGGCGT ATCCTCAGCT GCTTCAGCAT 
300
CAGGAAGTTG CTTGGCCACC TGGTGTGGAG GTTCCCGGTG CTGCTTCCGC 
350
CGTCGAGCCA CTTCCTCCTG GTGTCAAACG CACCTCTGAA GCGCTCTACT 
400
ATCCGACTCT GTTGGGTGCC CATAATACAA TTGGTCAAAC CGAAGCTTGG 
450
TATACTACAG ACTATTTTAC CAAGCGCCCT AAGTTGGAGA GTACAAGCCA 
500
TTTGCCTATA TATCCACAGA GGGCAGGAGA GAAAGATTGT ACCCACTATA 
550
TGCAAACAAG AACATGTAAA TTTGGAGAAA GCTGCAGGTT TGATCATCCT 
600
ATTTGGGTTC CTGAGGGCGG AATCCCAGAT TGGAAAGAGG CACCAGTTGT 
650
TCCAAATGAA GAGTATCCTG AGAGACCAGG AGAACCAGAT TGTCCTTACT 
700
ATATAAAAAC ACAACGCTGC AAATATGGTT CAAAGTGCAA ATTTAATCAT 
750
CCAAGAGAAG AGGCTGCAGT TAGTGTTGAA ACTCAAGATT CATTGCCTGA 
800
GAGGCCTTCT GAACCTATGT GCACATTCTA CATGAAGACT GGAAAATGTA 
850
AATTTGGTTT GTCATGCAAA TTCCACCATC CAAAGGATAT CCAGCTACCA 
900
TCATCGAGTC AAGATATTGG TAGCAGTGTG GGGTTAACCA GTGAGCCTGA 
950
TGCCACAAAC AATCCGCATG TCACATTTAC CCCAGCATTG TATCACAACT 
1000
CAAAAGGACT ACCTGTTAGA TCGGGTGAAG TGGACTGCCC ATTCTATCTC 
1050
AAAACGGGAA GCTGCAAGTA TGGAGCCACT TGTCGCTACA ATCATCCTGA 
1100
GAGGACTGCA TTCATTCCCC AAGCTGCTGG GGTAAACTAT TCTCTAGTTT 
1150
CATCGAACAC TGCGAATTTG AACCTTGGGC TGGTTACACC AGCTACCTCT 
1200
TTCTATCAGA CTCTTACTCA ACCCACGCTT GGAGTGATTT CAGCAACTTA 
1250
TCCCCAAAGA CCTGGACAAT CAGAATGTGA CTACTACATG AAGACAGGGG 
1300
AGTGCAAGTT TGGAGAGAGA TGCAAATTCC ATCACCCAGC AGATAGGTTA 
1350
AGTGCAATGA CCAAACAAGC TCCTCAACAA CCAAATGTAA AGCTGAGTCT 
1400
TGCAGGGTAT CCCAGAAGAG AGGGTGCGCT TAATTGCCCT TATTACATGA 
1450
AGACAGGAAC TTGCAAATAC GGGGCAACAT GCAAGTTTGA CCATCCTCCT 
1500
CCAGGTGAGG TGATGGCTAA GACCACTTCA GAAGCCGATG CTGCTGGAGC 
1550
AACCAACACC GACACTACTC AATGA
1600

>AT3G12680.1 longest ORF length:524
MAHRQLYSYA LQPSYAAAAS TVSPAPPPPQ QPLPPKTGLS SLYGSSADHY 
50
FPDTTYRFLA RDGSEALSNY SGTLASSSSM YHHLPNTTAS HLAYPQLLQH 
100
QEVAWPPGVE VPGAASAVEP LPPGVKRTSE ALYYPTLLGA HNTIGQTEAW 
150
YTTDYFTKRP KLESTSHLPI YPQRAGEKDC THYMQTRTCK FGESCRFDHP 
200
IWVPEGGIPD WKEAPVVPNE EYPERPGEPD CPYYIKTQRC KYGSKCKFNH 
250
PREEAAVSVE TQDSLPERPS EPMCTFYMKT GKCKFGLSCK FHHPKDIQLP 
300
SSSQDIGSSV GLTSEPDATN NPHVTFTPAL YHNSKGLPVR SGEVDCPFYL 
350
KTGSCKYGAT CRYNHPERTA FIPQAAGVNY SLVSSNTANL NLGLVTPATS 
400
FYQTLTQPTL GVISATYPQR PGQSECDYYM KTGECKFGER CKFHHPADRL 
450
SAMTKQAPQQ PNVKLSLAGY PRREGALNCP YYMKTGTCKY GATCKFDHPP 
500
PGEVMAKTTS EADAAGATNT DTTQ
550