Locus |
Common name |
Short description |
AT3G12730 |
|
Homeodomain-like superfamily protein (.1) |
>AT3G12730.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
NcoI
| C|CATGG |
574, 608 |
SpeI
| A|CTAGT |
334 |
StyI
| C|C[AT][AT]GG |
126, 574, 608 |
Click here to view TAIR data
>AT3G12730.1 length:708
ATGATGCAGT CGAGAGAGGA GATCAGAGAT GATTCATCAT CAGGTCTCGT | 50 |
CCTCACCACT GACCCTAAGC CTCGCCTTCG CTGGACCACA GAGCTTCACG | 100 |
AACGCTTCGT TGACGCCGTC ACTCACCTTG GAGGCCCTGA AAAGGCTACA | 150 |
CCAAAGACAA TAATGAGAGT TATGGGTGTG AAGGGTCTCA CTCTTTATCA | 200 |
TCTCAAGAGC CATCTCCAGA AGTTCAGACT TGGGAAGCAG CCTCACAAGG | 250 |
AGCATAGTCA AAATCACTCC ATTTGTATTA GAGATACAAA TAGAGCTTCC | 300 |
ATGTTGGATC TTCGAAGGAA TGCTGTTTTC ACGACTAGTC CGCTCATCAT | 350 |
TGGTCGCAAT ATGAACGAGA TGCAAATGGA GGTGCAAAGA AGGATAGAGG | 400 |
AAGAGGTAGT AATAGAAAGA CAGGTGAATC AAAGGATAGC GGCACAAGGG | 450 |
AAATACATGG AGAGCATGTT AGAGAAAGCA TGTGAAACCC AAGAAGCAAG | 500 |
CCTCACTAAA GACTACTCTA CTCTATTTTT CGACCGCACC AATATTTGTA | 550 |
ACAACACATC GTCCATCCCA ATCCCATGGT TCGAGGATCA TTTTCCTTCC | 600 |
TCTTCCTCCA TGGACTCTAC GTTGATTCTC CCCGACATCA ATTCCAACTT | 650 |
CTCCCTACAA GATTCTAGGA GTTCCATCAC TAAGGGCCGT ACGGTTTGTC | 700 |
TCGGTTAG | 750 |
>AT3G12730.1 longest ORF length:235
MMQSREEIRD DSSSGLVLTT DPKPRLRWTT ELHERFVDAV THLGGPEKAT | 50 |
PKTIMRVMGV KGLTLYHLKS HLQKFRLGKQ PHKEHSQNHS ICIRDTNRAS | 100 |
MLDLRRNAVF TTSPLIIGRN MNEMQMEVQR RIEEEVVIER QVNQRIAAQG | 150 |
KYMESMLEKA CETQEASLTK DYSTLFFDRT NICNNTSSIP IPWFEDHFPS | 200 |
SSSMDSTLIL PDINSNFSLQ DSRSSITKGR TVCLG | 250 |
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