fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G12820 ATMYB10 myb domain protein 10 (.1)

>AT3G12820.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 82
HindIII A|AGCTT 254
NcoI C|CATGG 52, 618
SmaI CCC|GGG 294
StyI C|C[AT][AT]GG 52, 218, 618


Click here to view TAIR data

>AT3G12820.1 length:720
ATGGGGAATA GAAGAGCACC ATGCTGTGAC AAAAGCCAAG TGAAGAGAGG 
50
GCCATGGAGT GATGAAGAAA GTGAAAGACT CAGATCTTTT ATCCTCAAAA 
100
ATGGTCATCA AAATTGGCGA TCTCTTCCCA AACTCGCTGG ATTGATGAGA 
150
TGCGGAAAGA GTTGTCGTCT AAGATGGATA AACTATCTGA GACCAGGTCT 
200
CAAACGAGGC AACTTCACCA AGGAGGAGGA AGATACCATT ATCCACCTTC 
250
ACCAAGCTTA TGGAAACAAG TGGTCTAAGA TCGCATCCAA CTTCCCGGGA 
300
AGGACAGACA ACGAGATCAA GAATGTATGG AACACTCATC TCAAGAAGCG 
350
GTTGGTGAAG AGGAGCATTT CATCATCATC ATCCGATGTT ACCAATCATT 
400
CAGTGTCTTC TACCTCTTCT TCCTCTTCCT CAATCTCGTC AGTCTTGCAG 
450
GACGTTATTA TTAAGAGTGA GAGGCCTAAC CAGGAAGAGG AGTTTGGGGA 
500
AATCTTGGTG GAGCAAATGG CATGTGGATT TGAGGTGGAT GCACCACAAT 
550
CACTAGAATG TCTCTTTGAC GATAGCCAGG TTCCTCCTCC TATATCTAAA 
600
CCAGACTCAC TACAAACCCA TGGGAAGTCA TCAGATCACG AATTTTGGAG 
650
CCGACTGATT GAACCAGGGT TCGATGATTA CAATGAGTGG CTCATTTTCT 
700
TGGATAACCA AACTTGCTAG 
750

>AT3G12820.1 longest ORF length:239
MGNRRAPCCD KSQVKRGPWS DEESERLRSF ILKNGHQNWR SLPKLAGLMR 
50
CGKSCRLRWI NYLRPGLKRG NFTKEEEDTI IHLHQAYGNK WSKIASNFPG 
100
RTDNEIKNVW NTHLKKRLVK RSISSSSSDV TNHSVSSTSS SSSSISSVLQ 
150
DVIIKSERPN QEEEFGEILV EQMACGFEVD APQSLECLFD DSQVPPPISK 
200
PDSLQTHGKS SDHEFWSRLI EPGFDDYNEW LIFLDNQTC
250