fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G12977 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (.1)

>AT3G12977.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
SacI GAGCT|C 88
StyI C|C[AT][AT]GG 178, 429
XhoI C|TCGAG 463


Click here to view TAIR data

>AT3G12977.1 length:840
ATGGAGGAGA CAGAAAAGAA TAAGGGCAGC ATAAGTATGG TTGAGGCTAA 
50
TCTACCTCCT GGTTTTAGAT TCCATCCTAG AGACGACGAG CTCGTCTGTG 
100
ACTACTTAAT GAGAAGAACC GTTCGCAGCC TCTATCAACC AGTTGTCTTG 
150
ATCGACGTCG ATCTTAACAA ATGCGAGCCT TGGGACATTC CTCAAACGGC 
200
GAGAGTGGGA GGGAAAGAAT GGTACTTTTA CAGCCAAAAA GACCGTAAAT 
250
ACGCAACAGG CTACAGAACA AACCGGGCTA CGGCCACCGG TTATTGGAAA 
300
GCCACCGGGA AAGATAGAGC AATCCAAAGA AACGGTGGTC TTGTGGGTAT 
350
GAGAAAGACA CTTGTGTTTT ACCGAGGTCG ATCCCCTAAA GGTCGTAAAA 
400
CTGATTGGGT CATGCATGAG TTTCGTCTCC AAGGAAAACT TCTTCACCAC 
450
TCCCCTAATT CTCTCGAGGA AGAGTGGGTA TTGTGTAGAG TTTTCCACAA 
500
GAACAGCAAC GGAGCTGATA TAGACGACAT CACAAGGAGC TGCTCTGATG 
550
CAACAGCTTC TGCATTCATG GACTCTTACA TCAACTTCGA CCATCATCAC 
600
ATCATCAATC AGCATGTACC CTGCTTCTCC AATAATTTGT CACATAACCA 
650
AACCAACCAA TCCGGTTTAA TCTCCAAGAA CTCCAGCCCA TTGTTTAATG 
700
CTTCCCCTGA TCAAATGATT CTCAGAACTT TGCTAAGTCA ACTCACAAAA 
750
AAAGTCGAAG AATCACAGAG TCGTGGAGAC GGAAGCTCAG AGAGCCAATT 
800
GACCGACATT GGCATCCCAA GCCATGCATG GAATTACTGA 
850

>AT3G12977.1 longest ORF length:279
MEETEKNKGS ISMVEANLPP GFRFHPRDDE LVCDYLMRRT VRSLYQPVVL 
50
IDVDLNKCEP WDIPQTARVG GKEWYFYSQK DRKYATGYRT NRATATGYWK 
100
ATGKDRAIQR NGGLVGMRKT LVFYRGRSPK GRKTDWVMHE FRLQGKLLHH 
150
SPNSLEEEWV LCRVFHKNSN GADIDDITRS CSDATASAFM DSYINFDHHH 
200
IINQHVPCFS NNLSHNQTNQ SGLISKNSSP LFNASPDQMI LRTLLSQLTK 
250
KVEESQSRGD GSSESQLTDI GIPSHAWNY
300