fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G13040 myb-like HTH transcriptional regulator family protein (.1.2)

>AT3G13040.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 358, 593
HindIII A|AGCTT 77
PstI CTGCA|G 1247
PvuII CAG|CTG 1048
SacI GAGCT|C 745


Click here to view TAIR data

>AT3G13040.2 length:1350
ATGTACATCA AAGCAATCAT GAACAGACAC AGGCTTCTCT CAGCGGCAAC 
50
AGATGAATGC AATAAAAAAC TTGGTCAAGC TTGCTCTTCT TCTTTATCTC 
100
CAGTCCATAA CTTTCTGAAT GTCCAGCCAG AACACCGGAA AACTCCTTTC 
150
ATAAGGTCAC AATCTCCAGA TTCACCTGGT CAGCTATGGC CAAAGAATAG 
200
TTCTCAGAGC ACCTTCTCTC GGTCTTCCAC CTTTTGCACA AACCTCTACT 
250
TGTCATCATC TTCAACCTCT GAGACTCAGA AACATCTAGG AAACAGTCTT 
300
CCTTTCCTCC CTGATCCCTC CTCTTACACC CACTCAGCTT CTGGTGTGGA 
350
GTCTGCAAGA TCTCCATCTA TTTTCACTGA GGATTTGGGC AATCAATGTG 
400
ATGGAGGCAA CTCCGGGTCG CTTCTCAAAG ACTTCCTTAA TCTTTCTGGA 
450
GATGCTTGTT CCGATGGCGA TTTTCATGAT TTTGGCTGTT CGAATGACAG 
500
CTATTGCTTA TCAGATCAAA TGGAATTACA GTTCCTGTCT GATGAACTTG 
550
AGCTGGCTAT CACAGACCGC GCTGAAACTC CCAGGCTTGA TGAGATCTAT 
600
GAAACGCCAT TGGCGTCAAA TCCAGTGACG AGATTGAGTC CAAGCCAAAG 
650
CTGTGTTCCT GGAGCAATGT CTGTAGACGT AGTTTCATCT CACCCTTCTC 
700
CGGGATCAGC AGCCAATCAA AAGTCGAGAA TGAGATGGAC TCCTGAGCTC 
750
CACGAGTCTT TTGTAAAGGC GGTGATCAAA CTTGAAGGGC CTGAAAAGGC 
800
CACTCCAAAG GCTGTTAAGA AGCTCATGAA TGTTGAGGGC TTGACGATCT 
850
ATCATGTAAA AAGCCACTTG CAGAAGTATA GACTAGCCAA GTATATGCCA 
900
GAGAAAAAAG AAGAGAAAAG GACTGATAAC TCAGAAGAAA AGAAACTGGC 
950
TTTGAGTAAG AGTGAAGCTG ACGAGAAGAA GAAAGGGGCC ATACAATTAA 
1000
CTGAAGCACT GCGTATGCAG ATGGAAGTTC AGAAGCAATT GCATGAACAG 
1050
CTGGAGGTGC AACGGGTGCT TCAGCTACGA ATTGAAGAGC ATGCTAAATA 
1100
CTTGGAAAAG ATGTTGGAAG AACAACGCAA AACAGGAAGG TGGATTTCTT 
1150
CTTCTTCGCA GACAGTGTTA TCACCTAGTG ATGACTCTAT ACCAGATTCT 
1200
CAAAACATGT CCAAAACCAA AGCATCTTCG CCTCAGCCGC CATTACCTGC 
1250
AGAGAACAAA GCGTCGGAAA CCGAAGACGA TAAATGTGAA AGCCCTCAGA 
1300
AACGTCGCAG GCTTGAGAAC ATAGCTGAAT CTGAAGATCC TAAGAGGTAG 
1350

>AT3G13040.2 longest ORF length:449
MYIKAIMNRH RLLSAATDEC NKKLGQACSS SLSPVHNFLN VQPEHRKTPF 
50
IRSQSPDSPG QLWPKNSSQS TFSRSSTFCT NLYLSSSSTS ETQKHLGNSL 
100
PFLPDPSSYT HSASGVESAR SPSIFTEDLG NQCDGGNSGS LLKDFLNLSG 
150
DACSDGDFHD FGCSNDSYCL SDQMELQFLS DELELAITDR AETPRLDEIY 
200
ETPLASNPVT RLSPSQSCVP GAMSVDVVSS HPSPGSAANQ KSRMRWTPEL 
250
HESFVKAVIK LEGPEKATPK AVKKLMNVEG LTIYHVKSHL QKYRLAKYMP 
300
EKKEEKRTDN SEEKKLALSK SEADEKKKGA IQLTEALRMQ MEVQKQLHEQ 
350
LEVQRVLQLR IEEHAKYLEK MLEEQRKTGR WISSSSQTVL SPSDDSIPDS 
400
QNMSKTKASS PQPPLPAENK ASETEDDKCE SPQKRRRLEN IAESEDPKR
450