Locus |
Common name |
Short description |
AT3G13540 |
ATMYB5, ATM2 |
myb domain protein 5 (.1) |
>AT3G13540.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XhoI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
258 |
NcoI
| C|CATGG |
79 |
StyI
| C|C[AT][AT]GG |
79 |
XbaI
| T|CTAGA |
477 |
Click here to view TAIR data
>AT3G13540.1 length:750
ATGATGTCAT GTGGTGGGAA GAAGCCAGTG TCTAAGAAAA CAACGCCGTG | 50 |
TTGCACGAAG ATGGGGATGA AGAGAGGACC ATGGACGGTG GAGGAAGACG | 100 |
AGATTCTTGT GAGCTTCATT AAGAAAGAAG GTGAAGGACG GTGGCGATCG | 150 |
CTTCCTAAGA GAGCTGGTTT ACTCAGATGT GGAAAGAGCT GTCGTCTACG | 200 |
GTGGATGAAC TATCTCCGAC CCTCGGTTAA ACGTGGAGGA ATTACGTCGG | 250 |
ACGAGGAAGA TCTCATCCTC CGTCTTCACC GCCTCCTCGG CAACAGGTGG | 300 |
TCATTGATCG CGGGAAGGAT ACCGGGAAGG ACTGATAATG AAATTAAGAA | 350 |
CTATTGGAAC ACTCATCTTC GTAAGAAACT TTTAAGGCAA GGAATTGATC | 400 |
CTCAAACCCA CAAGCCTCTT GATGCAAACA ACATCCATAA ACCAGAAGAA | 450 |
GAAGTTTCCG GTGGACAAAA GTACCCTCTA GAGCCTATTT CTAGTTCTCA | 500 |
TACTGATGAT ACCACTGTTA ATGGCGGGGA TGGAGATAGC AAGAACAGTA | 550 |
TCAATGTCTT TGGTGGTGAA CACGGCTACG AAGACTTTGG TTTCTGCTAC | 600 |
GACGACAAGT TCTCATCGTT TCTTAATTCG CTCATCAACG ATGTTGGTGA | 650 |
TCCTTTTGGT AATATTATCC CAATATCTCA ACCTTTGCAG ATGGATGATT | 700 |
GTAAGGATGG GATTGTTGGA GCGTCGTCTT CTAGCTTAGG ACATGACTAG | 750 |
>AT3G13540.1 longest ORF length:249
MMSCGGKKPV SKKTTPCCTK MGMKRGPWTV EEDEILVSFI KKEGEGRWRS | 50 |
LPKRAGLLRC GKSCRLRWMN YLRPSVKRGG ITSDEEDLIL RLHRLLGNRW | 100 |
SLIAGRIPGR TDNEIKNYWN THLRKKLLRQ GIDPQTHKPL DANNIHKPEE | 150 |
EVSGGQKYPL EPISSSHTDD TTVNGGDGDS KNSINVFGGE HGYEDFGFCY | 200 |
DDKFSSFLNS LINDVGDPFG NIIPISQPLQ MDDCKDGIVG ASSSSLGHD | 250 |
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