fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G13810 ATIDD11 indeterminate(ID)-domain 11 (.1), indeterminate(ID)-domain 11 (.2), indeterminate(ID)-domain 11 (.3)

>AT3G13810.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XhoI
Name Recognition sequence Cut positions
NcoI C|CATGG 370
SacI GAGCT|C 464
StyI C|C[AT][AT]GG 370, 988, 1528
XbaI T|CTAGA 460


Click here to view TAIR data

>AT3G13810.1 length:1542
ATGATGAACA AAGACATGTT ACTTCACCAG CATCAGCAAC CACAACAAGA 
50
CGAGAATATG TCGAATCTAA CATCAGCTTC CGGGGATCAA GCAAGTGTCT 
100
CTTCAGGAAA TATAACTGAA GCAAGTGGTT CTAATTACTT CCCTCATCAT 
150
CAGCAACAGC AAGAACAACA ACAACAACAG TTAGTTGTTC CAGATTCGCA 
200
GACTCAAAAG AAGAGGAGAA ACCAACCAGG GAATCCAGAC CCAGAATCAG 
250
AAGTGATAGC TCTATCACCA AAAACACTAA TGGCAACAAA CAGATTCGTG 
300
TGTGAAATCT GCAACAAAGG TTTTCAAAGA GACCAGAATC TACAGCTTCA 
350
TAGAAGAGGT CACAATCTGC CATGGAAGCT GAAACAAAGA TCCAACAAAG 
400
AAGTGATAAG GAAGAAAGTG TATGTATGTC CAGAAGCAAG CTGTGTCCAC 
450
CATGATCCAT CTAGAGCTCT CGGTGACTTA ACCGGAATCA AGAAGCATTT 
500
CTGTAGAAAA CATGGTGAGA AGAAGTGGAA ATGTGATAAG TGTTCAAAGA 
550
AATATGCTGT TCAATCAGAT TGCAAGGCTC ATTCTAAGAC TTGTGGCACC 
600
AAAGAATACA GATGTGACTG TGGCACTCTC TTTTCTAGGA GGGATAGTTT 
650
CATAACTCAT AGAGCATTTT GTGAAGCATT GGCTGAAGAG ACTGCAAGAG 
700
AAGTAGTAAT ACCACAAAAC CAGAATAATA ATCAACCAAA CCCTCTTTTG 
750
ATTCATCAAT CTGCTTCTCA TCCTCATCAC CATCATCAAA CACAACCAAC 
800
CATAAACGTC TCTTCTTCTT CATCTTCCTC CCACAACCAC AACATCATCA 
850
ATAGCCTTCA CTTCGACACC AACAATGGTA ATACTAATAA TAGTAACAAC 
900
AGCAACAACC ATCTCCATAC ATTTCCCATG AAGAAAGAGC AACAAAGCAA 
950
TGACCATATC ATGAATTACC ACCATAGTAT CATCCCTCCT TGGCTTGCTC 
1000
CTCAGCCTCA CGCACTCACA TCTTCAAACC CTAACCCTAG TAATGGTGGA 
1050
GGAGGAGGAG GAAGTTTGTT CTCTCTTGCT TCTCCGGCTA TGTCAGCCAC 
1100
CGCATTGCTC CAGAAAGCAG CCCAAATGGG CTCTACAAAG ACACCTCCTT 
1150
TACCACCAAC CACGGCCTAC GAGAGGTCAA CTCATAATAA CAACCTCACA 
1200
ACGACAATGG CGGCGATGAT GACGTCACCA TCTGGATTCA TCAGCTCCAA 
1250
CAACAACAAT CATGTTTTGT TTCAAGACTA CAACGCATCC GGGTTTGATA 
1300
ATCACGGCAG AGAAGAAGCA TTCGACGATA CATTTGGCGG GTTCTTGAGA 
1350
ACAAACGAAG TTACAGCCGC CGCAGGATCA GAGAAGAGTA CTAAAAGCGG 
1400
TGGAGGAGAA GGTTTGACGA GAGATTTCTT GGGGCTAAGA CCGTTAATGT 
1450
CTCATAACGA GATTCTAAGT TTTGCTGGTC TTGGAAGTTG CATAAATAGC 
1500
TCTGCTTCTG ATCAGCTTCA TCCAAAGCCT TGGCAGGGTT AG
1550

>AT3G13810.1 longest ORF length:513
MMNKDMLLHQ HQQPQQDENM SNLTSASGDQ ASVSSGNITE ASGSNYFPHH 
50
QQQQEQQQQQ LVVPDSQTQK KRRNQPGNPD PESEVIALSP KTLMATNRFV 
100
CEICNKGFQR DQNLQLHRRG HNLPWKLKQR SNKEVIRKKV YVCPEASCVH 
150
HDPSRALGDL TGIKKHFCRK HGEKKWKCDK CSKKYAVQSD CKAHSKTCGT 
200
KEYRCDCGTL FSRRDSFITH RAFCEALAEE TAREVVIPQN QNNNQPNPLL 
250
IHQSASHPHH HHQTQPTINV SSSSSSSHNH NIINSLHFDT NNGNTNNSNN 
300
SNNHLHTFPM KKEQQSNDHI MNYHHSIIPP WLAPQPHALT SSNPNPSNGG 
350
GGGGSLFSLA SPAMSATALL QKAAQMGSTK TPPLPPTTAY ERSTHNNNLT 
400
TTMAAMMTSP SGFISSNNNN HVLFQDYNAS GFDNHGREEA FDDTFGGFLR 
450
TNEVTAAAGS EKSTKSGGGE GLTRDFLGLR PLMSHNEILS FAGLGSCINS 
500
SASDQLHPKP WQG
550